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PLM3_30_b2_sep16_scaffold_3927_13

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: comp(10040..10528)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XK22_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 162.0
  • Bit_score: 174
  • Evalue 6.10e-41
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF59845.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 162.0
  • Bit_score: 174
  • Evalue 8.50e-41
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 163.0
  • Bit_score: 151
  • Evalue 2.00e-34

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 489
GACCAGCACGCTTTCAGTGAGCTGGTTCGGCGGCACCAATCCGCCGTGCGCGGCCTGCTCCGTCAACTTACTCGGACGGACGTTGCTCTGGCGGACGATCTGGCGCAACAAGCATTCCTGCGCGCGTATAAAAACATTCGCAGCTTTCGCGGCGAAGCACGCTTTTCCACGTGGCTTTACCGAATCGCTTACAATTGTTTTCGAGAAGATGCGCGCCGGCGGAAGGAACTTGTGGGAATCGACGAGGAACAAATCCAAAGACAACGGGATCCTCAGGTTGCCGACCCTGGTTTAAGGCACGATCTTATGCGCGCATTGAATTTACTTCCTTTGAATGAACGTTCTGCGGTTTTGCTTTGTTGCCAGAACGGGCTTTCGCACGATGAAGCTGCTCGCGTTCTCGACATCCCTCTTGGTACCGTGAAGACAAATGTTCTCCGGGGTCGCGAGAAATTAAAACGAATGCTTGCCGACTGGGGTCCAAACTAA
PROTEIN sequence
Length: 163
DQHAFSELVRRHQSAVRGLLRQLTRTDVALADDLAQQAFLRAYKNIRSFRGEARFSTWLYRIAYNCFREDARRRKELVGIDEEQIQRQRDPQVADPGLRHDLMRALNLLPLNERSAVLLCCQNGLSHDEAARVLDIPLGTVKTNVLRGREKLKRMLADWGPN*