ggKbase home page

PLM3_30_b2_sep16_scaffold_4849_3

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 950..2425

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQX3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 407.0
  • Bit_score: 422
  • Evalue 5.10e-115
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF57750.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 407.0
  • Bit_score: 422
  • Evalue 7.10e-115
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 419.0
  • Bit_score: 205
  • Evalue 2.80e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1476
ATGCTTGCCGAACGCGAAAAAATGAAAACTCGCAAGCAAGCAATCGACAAGTGCGCAGGCAAGTGCGGTCGAAGAATCTTAATTTCTGTCGTCGTGCTGCTTGCTATCACCTGCTTGCTCACATTATCGGCATGGCCAAGGAACAAGAATGAAGCAAACAAGGCCGCTGCATCGTTCCCAATTTTCGATGATCCGCTGGCCCTGGTGCTGACACCACAGACAGGTGACAGCCGTAACGACAGGGAAATTTCCCGGCTCCAGCAGCAAATTCGCAACGGAAGGAATCTTCAGCTTGGTCTTGAACAACTCGGCTGGGCATTCGTTACGAAAGCGCGGGAAAGTTTCGATCCAGGGTTCTACAAACTGGCGGAGGAGTGCGCGTGGTGCATCGAAAAGCGCAATCCGCAAAGCCAGGAAGCGATGTTGTTACGTGCGCACATGCTGCAGAATCTGCATCGCTTTAAAGAATCCGAAACGCTGGCACGCCGTCTCGTCCAGCAGCGCGGACTCAGCTTTGACTACGGTCTTCTGGGTGATGCTTTGATGGAGCAAGGGAAACTGAGCGACGCGGTTGAGGCTTACCAGCGGATGATGAATTTGAAGCCCGACCTTCGCGCATACGCCCGCGCGGCGCATATGCGGTGGCTCAAAGGCGATCTCGCGGGAGCGATCGGCGCGATGCAACTGGCTGCGAGCGCTGCCAGTCCAAGCGATGCCGAATCCGCCGCGTGGGTGAACACGCGTTTGGCGTTTTACGAGTATCAAGCTGGCCACGCTGACGAAGCAGAACAGCGTTGTGCGTTTGCCCTGTCGCTACAAAACAATTATGCGCCAACGCTCCTGCTGAAGGGGAAAGTGCGGCTTGCTCAAAACCGGTTCCCCGAAGCCGTGGAAGCTTTACAAACCGCCGCGAAGATGAATCCACTTCCGGAATATCAGTGGACGCTCGCCGAAGCGCTGCGCGCAGTTGGCCGCGAAAACGAAGCGTCTGGAATCGAGGTGCAACTTCGGAAGCACGGCCCGAGTACCGATCCGCGGACAATGGCGTTGTTTCTCGCGACGCGACACGAAAATCCTGAGACGGCGCTTCGACTTGCGCGATCGGAATTTGATTCGCGTGGTGACGTCTTCACTCACGACGCTCTGGCGTGGTCGCTAGCCGCCGCAGGTAACCTGGCCGAAGCGCATGGCGAAATGCAACGCGACTTGGCAGAAGGCACGGAAGACGCGCGGCTCTTTTTCCACGCTGCGGTGATCGCTTCACAAGCTGGTCACGCAGCTGATGCCGAGCGTTGGTTGCGCAAAGCGAGCGGACTCTCGCAGCTGCTTTTGCCATCTGAACGCAACGAACTTCAAAACGCTGCGGCGCGTGGCGCGGACAAGAAGGCGTCCATTGCCCCGAATCCACAAAAGACTTTTTCGCTCGGTCTAAAAACCGTGCGGAAAACCCAACCTCAACCTCAAACCAAAAGCTAA
PROTEIN sequence
Length: 492
MLAEREKMKTRKQAIDKCAGKCGRRILISVVVLLAITCLLTLSAWPRNKNEANKAAASFPIFDDPLALVLTPQTGDSRNDREISRLQQQIRNGRNLQLGLEQLGWAFVTKARESFDPGFYKLAEECAWCIEKRNPQSQEAMLLRAHMLQNLHRFKESETLARRLVQQRGLSFDYGLLGDALMEQGKLSDAVEAYQRMMNLKPDLRAYARAAHMRWLKGDLAGAIGAMQLAASAASPSDAESAAWVNTRLAFYEYQAGHADEAEQRCAFALSLQNNYAPTLLLKGKVRLAQNRFPEAVEALQTAAKMNPLPEYQWTLAEALRAVGRENEASGIEVQLRKHGPSTDPRTMALFLATRHENPETALRLARSEFDSRGDVFTHDALAWSLAAAGNLAEAHGEMQRDLAEGTEDARLFFHAAVIASQAGHAADAERWLRKASGLSQLLLPSERNELQNAAARGADKKASIAPNPQKTFSLGLKTVRKTQPQPQTKS*