ggKbase home page

PLM3_30_b2_sep16_scaffold_17902_3

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: comp(2040..2597)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD, ligase domain protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZP92_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 156.0
  • Bit_score: 157
  • Evalue 1.10e-35
DNA polymerase LigD ligase subunit similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 156.0
  • Bit_score: 157
  • Evalue 3.30e-36
DNA polymerase LigD, ligase domain protein {ECO:0000313|EMBL:ACB77581.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 156.0
  • Bit_score: 157
  • Evalue 1.60e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutus terrae → Opitutus → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 558
ATGGGACTGACCGAATACAAGCGGAAGCGCAACTTCAAGAAAACAGCTGAGCCAGCCGGTGGCAAACCGTTACCGCGAAAGATCAAAGGTGCGTCGCGTTTTGTAGGGGAGAAACACCTGGCCGTAGAAGTGGAAGATCATCCAATCGAATACGAGCAGTTCGAAGGCATTATTCCCGAGGGGCAGTACGGCGGCGGCACAGTGATGGTGTGGGACCGTGGCAATTATCACGTTTTCGGGGAGCAGCCGGTGAAATCGTTGCGCGAAGGCAAGCTCCATCTCGTTCTCGACGGCGAAAAAGCAAAAGGCGAATGGACCCTGGTCCGGATTCGGGATCGTGATGATGCCAAGAATCAGTGGTTGATCCTGAAAACAGGAGATGACGCGAAGCCCATATCGAAAAAATTGGAAGACCATTCGGTGAAAACTGGACGGACCATGCAGCAAATCGCAAAAGATCGCGATGCCGAGTGGGAGTCCGGCCGCGAAGCAGACGAAAGTCCCACATCGCAATTCAAAGCACGGATTCGTGCCGCATTAAAAAAAAGAAAAAGATGA
PROTEIN sequence
Length: 186
MGLTEYKRKRNFKKTAEPAGGKPLPRKIKGASRFVGEKHLAVEVEDHPIEYEQFEGIIPEGQYGGGTVMVWDRGNYHVFGEQPVKSLREGKLHLVLDGEKAKGEWTLVRIRDRDDAKNQWLILKTGDDAKPISKKLEDHSVKTGRTMQQIAKDRDAEWESGREADESPTSQFKARIRAALKKRKR*