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PLM3_30_b2_sep16_scaffold_188_33

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(26768..27331)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUP3_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 182.0
  • Bit_score: 167
  • Evalue 6.60e-39
sigK; RNA polymerase sigma factor, ECF family similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 182.0
  • Bit_score: 167
  • Evalue 1.90e-39
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 187.0
  • Bit_score: 275
  • Evalue 3.10e-71

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GTGGACGAGGACGATCGTCACGATCTCGAGCTGCACCGGCTGGTATCGGCTCGCGAGCGGTCGGCCTTCGACGAGCTGTACCGACGGTACGGCCGGTCGGCCTACGGTGTTGCGCTGCGCGTCACGTCGCAGGACCTGATCGCCCAGGAGGTCGTCCAGGACGCCTTCCTGGCGCTCTGGCGGGCGCCCGAGGCGTTCGACCCTGCGCGGGGGGCGTTCCGGTCATTCTTCCTGTCCCTGGTCCATCACCGGGCCGTCGATGCCGTCCGCCGTGAGGAGCGCCTCAGGCGCCGGACCGAGCGTGCGGCGAACCTCGAGCCCGTGACCGGCGAAGACCCTGCGGAGGACGTCGTCGAGGACGCGTACCTGCGCGTTCGGCGCAAGGAGGTTCGCGCCGCGCTCACGACCCTTCCTCCGGCGCAGCAGCAGGTGCTCGAGATGGCGTATTTCGAGGGCAAGACGCAGATGCGGATCGCCGAGGAGCTCGGCATCCCGATCGGAACCGTGAAGACGAGGACGCTGGCGGCCATGCGGAAGCTGCGCGAAGCCCTGCGAGAGGAGTGA
PROTEIN sequence
Length: 188
VDEDDRHDLELHRLVSARERSAFDELYRRYGRSAYGVALRVTSQDLIAQEVVQDAFLALWRAPEAFDPARGAFRSFFLSLVHHRAVDAVRREERLRRRTERAANLEPVTGEDPAEDVVEDAYLRVRRKEVRAALTTLPPAQQQVLEMAYFEGKTQMRIAEELGIPIGTVKTRTLAAMRKLREALREE*