ggKbase home page

PLM3_30_b2_sep16_scaffold_1384_19

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(17442..18398)

Top 3 Functional Annotations

Value Algorithm Source
Putative IS481 family ISAni1-like transposase Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82PL8_STRAW similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 328.0
  • Bit_score: 343
  • Evalue 1.50e-91
transposase similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 329.0
  • Bit_score: 344
  • Evalue 2.50e-92
Transposase {ECO:0000313|EMBL:AJF68591.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 329.0
  • Bit_score: 344
  • Evalue 1.20e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces vietnamensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 957
GTGTCTCATCCTAGGGCGAAGCTCACCGTTCACGGCCGCCGGCTGCTCGTGGAGCGTGTGCTCGAGGGCGGGTGGACCGTCCCGATGGCCGCCGAGGCCCAGGGGTGCTCTCCGGCGACCGGCTACAAGTGGGTCCGCCGGTTCACGGCCGAGGGCCTCGAGGGCCTCAGGGATCGCTCGAGCAGGCCTCGTCGCAGTCCGCTGCGTCTGTGTCCCGATCGAGAGGCGGCGATCCTCGCCAGACGCCAGGCGACGCTCGAGGGTCCGCACCGGATCGCCTGGGCGCTCGGGGAGGCACCCTCGACCGTGCACCGTGTGCTCCGCCGGCTCGGTGCCCCTCGCCTACGAGACCTCGACCGGCCCACCCGGGTGATCGTCCGCTACGAGCGGGAGCGACCGGGCGAGCTCGTCCACGTCGACGTGAAGAAGCAGGGCAGGATCCCCGACGGCGGAGGCTGGCGGATCCACGGCAGGGATCGGCGGGCCGGGTCCCGGAGGCTCCGGGGTCAGGGCTACGACTTCGTCCACGCGGCGGTCGATGACCGCTCGCGCCTGGCCTACGCCGAGATCCTGCCCGACGAGCGCAAGGAGACCGCCTCGGCGTTCATGACCCGAGCGATCGGGTTCTTCTCAGACCGCGGAATCACTGTCGAGCGCGTGCTCACCGACAACGGCGCGTGCTACCGCTCCCGACCCTTCGCCCGGGTCCTCGCCGATGCTGGCGTCGGCCACCGCCGGACCCGTCCCTACCGACCGCAGACCAACGGCAAGGTCGAGCGGTTCAACCTCACGCTCAAGTGGGAGTGGGCTTACGCGAGGCTCTACGAGACGAACGTCTCACGCACCGAGGCCCTCGAACGATGGCTCCATCACTACAACTACCATCGACCTCATATGGCGCATGCGGGCAAGCCCCCTATAACGGCCTTGAACAACGTCCCGAGGAAGCACATCTAG
PROTEIN sequence
Length: 319
VSHPRAKLTVHGRRLLVERVLEGGWTVPMAAEAQGCSPATGYKWVRRFTAEGLEGLRDRSSRPRRSPLRLCPDREAAILARRQATLEGPHRIAWALGEAPSTVHRVLRRLGAPRLRDLDRPTRVIVRYERERPGELVHVDVKKQGRIPDGGGWRIHGRDRRAGSRRLRGQGYDFVHAAVDDRSRLAYAEILPDERKETASAFMTRAIGFFSDRGITVERVLTDNGACYRSRPFARVLADAGVGHRRTRPYRPQTNGKVERFNLTLKWEWAYARLYETNVSRTEALERWLHHYNYHRPHMAHAGKPPITALNNVPRKHI*