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PLM3_30_b2_sep16_scaffold_561_14

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 11590..11967

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, type 11 domain protein Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T989_MYCVP similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 124.0
  • Bit_score: 193
  • Evalue 1.30e-46
helix-turn-helix, type 11 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 124.0
  • Bit_score: 193
  • Evalue 3.60e-47
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:AIG76655.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 125.0
  • Bit_score: 193
  • Evalue 1.80e-46

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Taxonomy

Amycolatopsis japonica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGCGAGCCGACCGTCTCGTCGCCGTCCTGCTGATCCTCCAGGCCCGGGGGCGCGTCACGGCCGCCGGGCTCGCCGACGAGCTCGAGATCTCCGAGCGCACGGCCCGCCGGGACCTCGAGGCGCTCGCGATGGCCGGGATCCCCGTCTACTCCCAGCCGGGACGCGGCGGGGGCTGGTCCCTGCTCGGTGGTGCGCGAACGGACCTGAGCGGGCTGACCGCGACCGAGGCGCGGACCCTCTTCCTGGTTGCGGGACCGTCGGCGTCGGCAACACCGCAGATCAAGGCGGCGCTCCGCAAGCTCGTCCGCGCCCTGCCCGAACCCTTCCGCGCCGAGGCCGAGGCGGCGGCGTCCGCGGTGGTCATCGACCCGGCGAGC
PROTEIN sequence
Length: 126
VRADRLVAVLLILQARGRVTAAGLADELEISERTARRDLEALAMAGIPVYSQPGRGGGWSLLGGARTDLSGLTATEARTLFLVAGPSASATPQIKAALRKLVRALPEPFRAEAEAAASAVVIDPAS