ggKbase home page

PLM3_30_b2_sep16_scaffold_1911_6

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 6397..6804

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent DNA ligase LigA {ECO:0000313|EMBL:EDM73688.1}; EC=6.5.1.2 {ECO:0000313|EMBL:EDM73688.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 106.0
  • Bit_score: 82
  • Evalue 2.80e-13
NAD-dependent DNA ligase LigA Tax=Plesiocystis pacifica SIR-1 RepID=A6GKA9_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 114.0
  • Bit_score: 87
  • Evalue 1.10e-14
histone protein similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 111.0
  • Bit_score: 70
  • Evalue 3.80e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Plesiocystis pacifica → Plesiocystis → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCCGGCGAGAAGGAGCAAGGCCGCAGCGCGGACCAAGAGCACCACGCGCAAGAAGACCGCCGCCCGGAAGAAGACCGCGACCCGGAAGAAGACGGCGGCCAAGAAGGCCACGACCCGGAAGAAGACGGCGGCCCGCAGGAAGCCGGCGGCCAAGAAGACCACGACCCGGAAGAAGACGGCGGCCCGCAGGAAGCCGGCGGCCAAGACGTCTGAGCAGCTCGGTGCCCCTCTTCCGCCTCCAGAGCCCGTGGAGCCCATCATGCCGGTGGCTGAGCCGAGCTTGATCCGAGAGGAGCCCGCAACTCAGCCCGCGTCCCCCCTGCCGGGGACACAGGAGGCTGAGGAACGGGGACTCTCCACGGACTTCTCCGAGCGCGAGGAGGACAACGCCGGGAAGGATTCGTAG
PROTEIN sequence
Length: 136
MPARRSKAAARTKSTTRKKTAARKKTATRKKTAAKKATTRKKTAARRKPAAKKTTTRKKTAARRKPAAKTSEQLGAPLPPPEPVEPIMPVAEPSLIREEPATQPASPLPGTQEAEERGLSTDFSEREEDNAGKDS*