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PLM3_30_b2_sep16_scaffold_1928_7

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(6184..7101)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 306.0
  • Bit_score: 334
  • Evalue 1.20e-88
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 290.0
  • Bit_score: 312
  • Evalue 7.60e-83
2-isopropylmalate synthase bin=GWC2_OP3_44_8 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 288.0
  • Bit_score: 326
  • Evalue 2.40e-86

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Taxonomy

Acidithrix ferrooxidans → Acidithrix → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
AACTCGCTGGCCGGGATCGTGAACGGGGCGAGGCAGGTCGAGGTAGCCGTGAACGGCATCGGAGAGCGGGCCGGCAACTGCTCGCTCGAGGAGGTCGCGATGATCGTCCGGACGCGCAGGGAGGCGCTCGGCGTCTCGCACGGACTGAACCTCCACGAGATCGTCCGCACGTCGCGCCTGGTGAGCATGACGACCGGGTACGGCGTCCAGCCGAACAAGGCGGTGGTCGGCTCGTCAGCGTTCGCGCACGAGAGCGGGATCCACCAGCACGGCGTGCTGGCGAATCGAGCGACCTACGAGATCATGGACCCGCTCGAGATCGGTCTGGAGGGGAACCAGCTCGTCCTCGGCAAGCACTCGGGACGGCACGCCTTCGCGGACGCGCTCGAGAAGATCGGGATCGAGCTCGACGAGGACCACCTCAACCGCGCCTTCGCGCGCTTCAAGGACCTCGCCGACCGGAAGATCCAGCTGACGGACCAGGACCTCGCGGCGATCGTCTCCGAGGAGCTCGGGGCGGCCGCCGAGGACGTGTTCGTGCTCGAGGCGCTCCAGGTTGGCGGCGGCACCGCGCTGTCGCCGACGGCCAGCGTTCGGCTCCGCCGGGGCGAGGAGATGATCGAGGAGTCCGCGATGGGCGACGGGATGATCGACGCCGCGATGGGCGCGATCCAGCGGGCGTCGGGGGTCGAGGGCCGGCTCGTCTCGTTCAACGTCTCGGCGGTCACCGGCGGCACGGACGCGTTAGGCGACGTCGTCGTGCAACTCGACGCGCTCGGACGCCGGGTGACGGGCCGGGGTGTCGCGACGGACGTGGTCGAGGCGAGCGCGCGCGCCTACCTCGCCGCGGTCAACCGCGCGATGCTGATGGCCAACCTCGAGGCCGAGGCCGAAGACGCCGAGAAGGTGACGCCGTGA
PROTEIN sequence
Length: 306
NSLAGIVNGARQVEVAVNGIGERAGNCSLEEVAMIVRTRREALGVSHGLNLHEIVRTSRLVSMTTGYGVQPNKAVVGSSAFAHESGIHQHGVLANRATYEIMDPLEIGLEGNQLVLGKHSGRHAFADALEKIGIELDEDHLNRAFARFKDLADRKIQLTDQDLAAIVSEELGAAAEDVFVLEALQVGGGTALSPTASVRLRRGEEMIEESAMGDGMIDAAMGAIQRASGVEGRLVSFNVSAVTGGTDALGDVVVQLDALGRRVTGRGVATDVVEASARAYLAAVNRAMLMANLEAEAEDAEKVTP*