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PLM3_30_b2_sep16_scaffold_13003_3

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(1223..1576)

Top 3 Functional Annotations

Value Algorithm Source
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 116.0
  • Bit_score: 106
  • Evalue 1.50e-20
rbfA; ribosome-binding factor A similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 114.0
  • Bit_score: 102
  • Evalue 4.60e-20
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 115.0
  • Bit_score: 148
  • Evalue 3.60e-33

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 354
GTGCCCGAGGGAAGCCGGCCGAACCGAGTCTCGGAGGAGTTCCGCGAGATCCTGGCGGAGGAGATCCCGAGGCTCAAGGATCCGCGCGTCGGGTTCGTCACGGTCCTGGGCGTCACGGTGACGCCCGACCTGCGCCTCGCGCGCGTGTTCTACACGACGTTGGGCGACGACCGCGCGCACCGAGCGACGGCGGCCGCGCTGGCGTCGGCCCGCGGGCACCTGCGCAAGGTGATCGGCACCCAGGTGCGCATGAAGGTGCTCCCCGAGCTGCGGTTCGAGCAGGAGGATGCGCGGGGAGGACCGGACCGCATCGAGCAGCTGCTCCGCGAGCTGCACGAGCAGGAGGGGACGTGA
PROTEIN sequence
Length: 118
VPEGSRPNRVSEEFREILAEEIPRLKDPRVGFVTVLGVTVTPDLRLARVFYTTLGDDRAHRATAAALASARGHLRKVIGTQVRMKVLPELRFEQEDARGGPDRIEQLLRELHEQEGT*