ggKbase home page

PLM3-1_50_b2_sep16_scaffold_2010_10

Organism: PLM6_50_b2_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(8087..8833)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 248.0
  • Bit_score: 369
  • Evalue 1.50e-99
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 248.0
  • Bit_score: 300
  • Evalue 4.20e-79
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 248.0
  • Bit_score: 391
  • Evalue 8.90e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGATTAAAGTAGTTGACCTGCACAAGACCTTCGGTGGCCAAGCGGTCCTCAAAGGCATCAATCTGGACCTCGAAACCGGCAAGGTCACGACGATCATCGGTGGCAGCGGTTCCGGCAAGACTGTGTTGTTAAAGCATCTCAACGCCCTCCTCCTCCCGGATCGCGGCAGCGTGCTGGTGGATGAGAAAGACATTACCAAGCTGGGCGAGCGCGAGCTCAATGAAGTTCGACAAAAATTCGGCGTCCTCTTTCAAGGCGCCGCCTTGCTCGACTCCATGACCCTTTACGACAATGTCGCTTTCCCTTTGCGCGAGAAAACCAAGATGTCGGAAAGCGAGATCCAAAAGAGAGTCGAGGAGCGATTAGCTCAGGTTGGACTTGCGGGTATGGGCTACAAGTATCCAGCCGAGGTCAGTGGCGGTATGAAAAAACGCGCCGGCCTGGCCCGCGCCTTGGCCATGGAACCCGAGATTGTGTTGTTCGATGAGCCCACCACCGGATTGGATCCTTTATTAGGCAAGAGCATTCACCAGCTCATTCGTAAAATGCATACCACATTCGGATTCACCGGAGTCATTGTGAGTCATGATATTCCGGAAGTGTTCAAGATCTCGGATCGGGTCGCTATGTTAGCGAATGGAGTCATCATGGAAGTCGGTTCGACGGAAGAATTCGTGGCGTCGAAAAATCCGGTGGTTCGGCAATTCCTGCAAAAGGATATCGAAGGTCCACTCTCGGTTCTATAG
PROTEIN sequence
Length: 249
MIKVVDLHKTFGGQAVLKGINLDLETGKVTTIIGGSGSGKTVLLKHLNALLLPDRGSVLVDEKDITKLGERELNEVRQKFGVLFQGAALLDSMTLYDNVAFPLREKTKMSESEIQKRVEERLAQVGLAGMGYKYPAEVSGGMKKRAGLARALAMEPEIVLFDEPTTGLDPLLGKSIHQLIRKMHTTFGFTGVIVSHDIPEVFKISDRVAMLANGVIMEVGSTEEFVASKNPVVRQFLQKDIEGPLSVL*