ggKbase home page

PLM3-1_50_b1_sep16_scaffold_145_17

Organism: PLM6_50_b1_sep16_Thaumarchaeota_Marine_Group_I_36_8

near complete RP 33 / 55 MC: 3 BSCG 19 / 51 MC: 2 ASCG 37 / 38 MC: 1
Location: 14335..15000

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt5 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH71_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 220.0
  • Bit_score: 248
  • Evalue 4.50e-63
nusG; transcription antitermination protein NusG similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 220.0
  • Bit_score: 248
  • Evalue 1.30e-63
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 220.0
  • Bit_score: 248
  • Evalue 6.40e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 666
TTGGAAGGTAGTACTAAAGGGAATGAAGACAATTTTGATGATCTAGACACGGTCTTTGTAGAAAAATCAGAAATCAAGAGTGAAACTACCTCTGATGTGTCCGAGAATATAGATAAAGGAGATGCGGTGCAAGCTGACGCTTCTGAATTAGACACAAACGTGGAAAAATCAGGGGGCATTGAGACAAGCACTGAAAATTCTCAAATACAGCCTGATAGTCAAGAATCAGATTCAAAATTTTTTGCAATTAGGACGACAGGTGGTCAGGAGCATATTGTGGTAAATCTAGCACAAAATAGAATAAATTCAAAGAAAATTCCTGTGCGTTCCATATTATTACTTGACAGCTTTAAGGGATACATAATAATCGAAGCTCCAAACTCCAATATTGCCTATGATGCTCTGATTGGAGTAAGACATGTAAAAGGACAGATCCGTGGAGAGTTACCTTACAAAGACATTGAAAATTATTTGGTGAAGAGACCAGTAGTATCCGAATTGAATATAGACGATACCGTTGAAGTCATTGCTGGCCCGTTTAAATCGATGAAGGCAAAGATAACCAGAGTTGACTATGAAAAGCAAGAGGCAACCGTGCTTCTACTGGATTCGCCATATCAAATACCCGTGACGGTAGACGCAAATTATCTTAAAAAGGCCTCATAG
PROTEIN sequence
Length: 222
LEGSTKGNEDNFDDLDTVFVEKSEIKSETTSDVSENIDKGDAVQADASELDTNVEKSGGIETSTENSQIQPDSQESDSKFFAIRTTGGQEHIVVNLAQNRINSKKIPVRSILLLDSFKGYIIIEAPNSNIAYDALIGVRHVKGQIRGELPYKDIENYLVKRPVVSELNIDDTVEVIAGPFKSMKAKITRVDYEKQEATVLLLDSPYQIPVTVDANYLKKAS*