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PLM3-1_50_b1_sep16_scaffold_1939_6

Organism: PLM6_50_b1_sep16_Aeromicrobium_marinum_64_7

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 9 / 38
Location: comp(2846..3460)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 133.0
  • Bit_score: 142
  • Evalue 5.90e-31
twitching motility protein PilT Tax=Serinicoccus profundi RepID=UPI000255E617 similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 128.0
  • Bit_score: 134
  • Evalue 6.70e-29
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 153.0
  • Bit_score: 129
  • Evalue 6.10e-28

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Taxonomy

Knoellia sinensis → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGCGAAATCAAGGGCGTGCCCGAACGCACTCATTCCGTTCTCCGGCAACGAGCGGCTGCCGCGCATCAGTCGCTCCAGGAATACCTCCTGCAGCTGCTCATCGAAGAGGCTGATCGACCAACGCTTGACGAGGTTCTTGATAGCGCAGGCAGCAGAAGTGGCGGATCCGTCAGTTTTGACGAAATCAATGCCATCATCCGTGCAGATCGTGATAGTCACTGACGCCGGGGTTCTGGTCGCCGCCTTCGTTGATGACGGGACGTGGGGAGAGATGGCCCGGGCTCGCGTGCGAAATGAGGACCTTGCAGCCCCCGAGCTGATCGATCTCGAGGTGACTTCCGCATTGCGCGGCCTGTTTCGCGTCGGAAAGGTCAACGAGTTTCGTGCACGCATTGCTCTGGCGGATCTCCGTCGTCTCCCGCTGCGGCGAGCGTCGCATCAAGGGCTGGTGACTCGCTGTTGGGAGCTTCGCAACAACCTGACGGCGTATGACGCGAGTTATGTCGCACTGGCTGAGCTGCTCGGGGCAACGCTTGTTACCACTGATGCTCGTCTTACTCGTGCGCCGCAAATCATGTGTTCGGTCGACCTATTGCCACGGACCGACAAATAG
PROTEIN sequence
Length: 205
MAKSRACPNALIPFSGNERLPRISRSRNTSCSCSSKRLIDQRLTRFLIAQAAEVADPSVLTKSMPSSVQIVIVTDAGVLVAAFVDDGTWGEMARARVRNEDLAAPELIDLEVTSALRGLFRVGKVNEFRARIALADLRRLPLRRASHQGLVTRCWELRNNLTAYDASYVALAELLGATLVTTDARLTRAPQIMCSVDLLPRTDK*