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PLM3-1_50_b1_sep16_scaffold_20178_1

Organism: PLM6_50_b1_sep16_Aeromicrobium_marinum_64_7

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 9 / 38
Location: 1..597

Top 3 Functional Annotations

Value Algorithm Source
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 197.0
  • Bit_score: 246
  • Evalue 1.20e-62
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 194.0
  • Bit_score: 243
  • Evalue 3.70e-62
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU74501.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 194.0
  • Bit_score: 243
  • Evalue 1.80e-61

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ACGCTCGGAACTGAACCCGAGCGGGCCGCCGAGCTCGCCGACTCCCTGGGGCCGGCCATGCTGGTGGTGCTGGAGACGTTGTCGCCGGCCGAGCGGATCGCCTTTGTGCTCCATGACATGTTCGCCGTTCCGTTCGATGAGATTGCCCCGATCGTCGGGCGTTCACCGGCTGCGGCGCGCCAGCTGGCCAGCCGCGCCCGCCGCCGCGTGCAGGGAGTCGCTGTCGCTCGCGATGATCGGGGCCGTGCCCGGCGGATTGTCGAGGCGTTCCTCACCGCTTCACGGAATGGGGACTTCGGTGCACTGCTTGCGCTGCTCGATCCCGATGTCGTGCTGTCAGCAGATGCCGATGCCGTGCGGGTGGGCGCGTCGGATCTGGTCCGCGGCGCGACGGGCGTCGCCGAGACATTCTCGGGGCGGGCTCGAGCCGCGCAGCTAGCCTTGATCGATGGACAACCGGGAGCCGCCTGGGCGCCTGGTGGGAAGCCTCGGGTCGTCTTCAGATTCACCGTCGATGACGGCAGGATCACAGCGATCCAGTTGCTGGCCAACTCGGCTCAACTTGACGAGCTCGACCTTGTGCTGTTGGACGACTGA
PROTEIN sequence
Length: 199
TLGTEPERAAELADSLGPAMLVVLETLSPAERIAFVLHDMFAVPFDEIAPIVGRSPAAARQLASRARRRVQGVAVARDDRGRARRIVEAFLTASRNGDFGALLALLDPDVVLSADADAVRVGASDLVRGATGVAETFSGRARAAQLALIDGQPGAAWAPGGKPRVVFRFTVDDGRITAIQLLANSAQLDELDLVLLDD*