ggKbase home page

PLM3-1_50_b1_sep16_scaffold_586_20

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: 19679..21808

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASD1_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 695.0
  • Bit_score: 597
  • Evalue 9.80e-168
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 695.0
  • Bit_score: 597
  • Evalue 2.80e-168
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:ABG05697.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 695.0
  • Bit_score: 597
  • Evalue 1.40e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2130
TTGACAAGCGAACGCGCAGCGGCCCACGAGGACGCGGCAATCGAGAGCTCCAGCCCGGCGCACGCCGCTGCGATCCTCGACGCTGCACTCGACCCGGTGATCACGATCGACCATCTCGGGCGAGTCCTCGAGTTCAACCGGGCCGCGGAGAGCGTGTTCGGGTATCGCAAGGACGAGGTCATCGGCCGGGAGCTGGCAGGACTCGTGATTCCGCCCGAGTCTCGCGAGGGGCATCGGCGAGCCCTGTCCCGCTGGTCGGCCTCCGGCCCGTCGAAGGGTGCTGGCGCGCTACTGGGGCGTCGCTTCGAGGTCGAAGCGATGCGCTCCGACGGCTCACGCTTTCCTGCCGAGCTGGCCATCAGCCAGGTCGACGCCCCGGGTGCGCCGCTCTTCACGGCTTGCCTCCGTGACGTCACCGACCGCAAGACGGGCGAGGAGGCCCTGCGCTTGGCGGAGGTCCGCTACAGGGCGCTCGTGGAACAGCTTCCACTCGCCATCTACATCGACAGGGTCGATCCGTCGAGCTCGAACATCTACTCGAGCCCACAGCTCGAGTCGATGCTGGGATACTCGGTCGACGAGTGGGTCTCGGACCCGTTGCTCTTTGTCGAGATCCTCCATCCCGACGATCGGGAGCGCGTGCTCGCAGCGCACGCGCGGATGCATGCGACGTCGGAGGCTCTCCACGTCGAGTATCGGCTGAAGGCGCGCGACGGCCGCTGGGTATGGGTGCAGGACGAGGCGCGAGTCGTCGAAGATGGGACCGAGCGCGTCGTGCAGGGGTACCTCCTCGACGTGACGGCTCGGAGGGAGGCGGAGGAGCAGCTCCGCCACCAGGCCTTCCACGACCCGCTCACGGGACTCGCGAACAGAGCCCTGTTTACGAACCGCGTCCACCACGCTCTCGTCGTCCGAGCTCACGAGAACGGTCAGGCCGCCGTGCTCTTCCTCGACCTCGACGACTTCAAGGCTGTCAACGACGGTCTCGGCCATCTCGCAGGGGACGCGCTCCTTCGCGCCGTCGGGGTGCGCCTGCGGGCATCGCTGCCCCCGAGTCTCACCGTGGCGCGAATGGGTGGGGACGAGTTCGCCATTCTCGTCGAGGAGCCCAACAGCGCAGGTGCTGCGCTCGATGCCGCGGAGCGTGTCACGGCCGCATTTCAGCGACCGTTCGACATCGACGGTCGAGAGGTCTTTGTCACAGCGAGCGTCGGGATCGCGGTCGGTACCGACGCCGACGAGCTGCTCCGATGCTCGGACGTGGCGATGTACGGCGCGAAGGCGAGCGGGAAAGCGCAGTACGTCGTCTACGCGGCGAGGATGGACGAGCATCTCGGCGATCGGCTCGAGCTCGTGGCAGACCTCCGGCGCGCGGGAATCGCTGAGGAATTCGTCCTCCACTACGAGCCGGTCGTCGACCTCGCGACCGGAGCGGTGCTCGGCGTCGAAGCGCTCGTCCGCTGGCGCCACCCGACTCGCGGCCTGCTCGAACCAGTCGAGTTCATCTCTCTCGCCGAGGAGACCGGTCGAATCGTCGACATCGGGCGGTGGGTGCTGGCCGAGGCTTGCCGGCAGACCGCGACCTGGCGGAAGGAGCTTCCCTTGTGCCGGGCGATGGCCGTGAGCGTCAATGTCTCGACTCGGCAGGTGCGGCGACCCGGGCTGCTCGAAGACGTCGAGGCTGCATTGCTGGCCTCAGGCCTTGCGCCCCAAGCCCTCACTCTCGAGATTACGGAGACGGTGCTCGCGCGGCGCCGCGGGGAGATGACGACCATCCTCGAGGAGGTGACGAGTCGCGGCGTACGGCTCGCCCTCGACGACTTCGGCACCGGATACTCGTCGCTCTCGCTACTGCGAGACCTCCCGGTGCACACACTCAAGGTCGATCGCTCGTTCGTTCACAGCATCGGAGCAGAGAGGGGTCGCGCGGCATTCGTCCGGGCCATCGTCGACCTCGCAGAGGCGCTCGACCTCACCGTTGTCGCCGAGGGTATCGAGGAGGCTGGCCAGGTGGTTGCCTTGAAGCGGGTTGGTTGTCGCATGGGACAGGGATTCCACTTCGCCGGGCCGCTGCCACCCACCGAGCTCGAGTCGTTCGTGCGAGCGAATCTCGGTCGCAGCGCCGCCTGA
PROTEIN sequence
Length: 710
LTSERAAAHEDAAIESSSPAHAAAILDAALDPVITIDHLGRVLEFNRAAESVFGYRKDEVIGRELAGLVIPPESREGHRRALSRWSASGPSKGAGALLGRRFEVEAMRSDGSRFPAELAISQVDAPGAPLFTACLRDVTDRKTGEEALRLAEVRYRALVEQLPLAIYIDRVDPSSSNIYSSPQLESMLGYSVDEWVSDPLLFVEILHPDDRERVLAAHARMHATSEALHVEYRLKARDGRWVWVQDEARVVEDGTERVVQGYLLDVTARREAEEQLRHQAFHDPLTGLANRALFTNRVHHALVVRAHENGQAAVLFLDLDDFKAVNDGLGHLAGDALLRAVGVRLRASLPPSLTVARMGGDEFAILVEEPNSAGAALDAAERVTAAFQRPFDIDGREVFVTASVGIAVGTDADELLRCSDVAMYGAKASGKAQYVVYAARMDEHLGDRLELVADLRRAGIAEEFVLHYEPVVDLATGAVLGVEALVRWRHPTRGLLEPVEFISLAEETGRIVDIGRWVLAEACRQTATWRKELPLCRAMAVSVNVSTRQVRRPGLLEDVEAALLASGLAPQALTLEITETVLARRRGEMTTILEEVTSRGVRLALDDFGTGYSSLSLLRDLPVHTLKVDRSFVHSIGAERGRAAFVRAIVDLAEALDLTVVAEGIEEAGQVVALKRVGCRMGQGFHFAGPLPPTELESFVRANLGRSAA*