ggKbase home page

PLM3-1_50_b1_sep16_scaffold_740_11

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(8356..9573)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4W4_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 357.0
  • Bit_score: 318
  • Evalue 8.50e-84
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 357.0
  • Bit_score: 318
  • Evalue 2.40e-84
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 367.0
  • Bit_score: 358
  • Evalue 8.00e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGTATGCGTTGACACGTGGCGACGCGAGGCATCCGATTCCCCTTGCGCTGCCGAGTGAGATCGTAGGACCGGATCCGCTCTCCTTCGACCCGGCACCAACCGCCGCTTACGAACGAGCAGCCGCTTTCGGGCTCAGTCACGTCCTTTTCGCCAAGAGCCCTGGCGGAGTCCTGACTGCGGCGAGTCGCACGGCCAGCTTTCGTCCCATCGTCGAGAAGTCCATCGCCGGGAGCGACATCGACGCCGACCTTGTCGAAGCTATCGTCCTTCTCGAGAGCGCCGGTCGGCCCGACGTCATCGCCGGCGACGACCCGGAGCATGCCGCCGGCCTCACCCAAATCCTGGCCGAGACAGCTACGAACTTCCTGGGGATGCACGTCGATCTCGGGACCAGCCGGACGCTGTCGCGGCAAATCGCCCAGGCGCAGGCGCGCGGTGACGAGCCCGCGGTTGTGCGCCTCCAGAGCGAGCGGCGTCGCGTCGACGAGCGTTTCGACCCGGCGCAGGCGCTTGCCGGCACAGTGCGCTACCTGAGTGAAGCGCGCCGCGACTTCGGGCGAGACGACCTCGCGGTTGTCTCCTACCACATGGGCATCGGCAACCTCGAGGGGGTCGTGCGCGCCTACTCGGGCCGCTCCAGCGAGCCGATCGCGGACGTCGTCGGTGAGAATGACCTCTCCTACGCTCGGCTCTACTTCGACTCCTCCCCGATCGCCCATCGCGAGGCCTGGCAGCAGCTTGCCTCCTTCGGTGACGACTCGCAGACCTACTACTGGCGCGTTCTTGCGGCGCGCGACATCATGCGCCTCTTCCGCGAGAATCGGGCACGGCTCGAGCGCCTTGCCGAGCTCCACGCGCATGGCCCCAGCGCCGAGCTCGTCTTGCACCCACCGCGGGGTACGAGCCGCTATGCGAACTCGGGCGATCTCGAGGTCGCGATCCAGCGAGGCCGCCTTCTACCCCTGCCCGACGATCCGGCGCGGCTGCACTTCCGCGTCGATCCCAGGCTTGCCGCAACGGTCCGCGACCTCGGCGGCGACCCTGCCGCATATCGCGCGCTCCGACCGAGGGCGTTGGGTCTTCTCGGCTACCTGGGCCAGGCAGCGGCGTTCCAGTGGACGCTCGAGAGGTTGGACGCGCTCGGCCTGATCGCGTGGACACGTGGCAAGAGCGTGATCCACATCACCGTGTCACCGCGCGCGGACGTCGCCCCGTGA
PROTEIN sequence
Length: 406
MYALTRGDARHPIPLALPSEIVGPDPLSFDPAPTAAYERAAAFGLSHVLFAKSPGGVLTAASRTASFRPIVEKSIAGSDIDADLVEAIVLLESAGRPDVIAGDDPEHAAGLTQILAETATNFLGMHVDLGTSRTLSRQIAQAQARGDEPAVVRLQSERRRVDERFDPAQALAGTVRYLSEARRDFGRDDLAVVSYHMGIGNLEGVVRAYSGRSSEPIADVVGENDLSYARLYFDSSPIAHREAWQQLASFGDDSQTYYWRVLAARDIMRLFRENRARLERLAELHAHGPSAELVLHPPRGTSRYANSGDLEVAIQRGRLLPLPDDPARLHFRVDPRLAATVRDLGGDPAAYRALRPRALGLLGYLGQAAAFQWTLERLDALGLIAWTRGKSVIHITVSPRADVAP*