ggKbase home page

PLM3-1_50_b1_sep16_scaffold_390_17

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(16169..16987)

Top 3 Functional Annotations

Value Algorithm Source
Vegetative cell wall protein gp1 (Hydroxyproline-richglycoprotein 1) bin=GWC2_Chloroflexi_73_18 species=Nocardioidaceae bacterium Broad-1 genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 277.0
  • Bit_score: 249
  • Evalue 3.30e-63
peptidase S1 and S6, chymotrypsin similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 266.0
  • Bit_score: 204
  • Evalue 2.60e-50
Tax=GWC2_RIF_CHLX_73_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.2
  • Coverage: 277.0
  • Bit_score: 249
  • Evalue 4.60e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 819
ATGAAAAGGATCACGTTGCTCGCCGCCGTCGGGCTGCTTACGTCGCTTGCGCTCGGAGCGTTCGCCCACGCGATCACCTTCGGCGAGAACGACAACGGCCGGCATCCGTTCGTGGGCTCGCTTGTCTTCGAGTTCCAGGGAGAGAAGAGCCAGGGCTGCTCGGGAACCCTCGTCTCGCCGACAGTCTTCGTCACGGCAGGCCACTGCCTGTTCGGTCTCGAGCAGTTCGGAATCACGGGGGTCTGGGTGACCTTCGACGAGGTCATCGACGCCGATGCCAACGGGATCGTCGATGCCGGTGTGACGCTGCACAGCGGGACCGGCCATGTCCACCCTGACTGGGGCTTCCCCGGATTGGGCGGCAACGCGGCGGATCCGCACGACGTCGCGGTCTTCGTGCTCGCCGCCCCCGTGAGCATGACCAACTACGGCCAGCTGCCGACCGCAGGTCAGCTGAACACGATCAGCAAGCGTGCGACGCGGTTTACGACCGTCGGATACGGCACCGTCCGTGACGACAAGACGCGTTCGTTCAAGTCTCTCGAGCTCGGAACCCGGCGCAAGATGGCGACGCAGGAGATGCAGTCGCTCACAACGGCGTGGGTTCAGTTCTCCATGAACCCATCCACCGGCAGTGGGGGAACCTGCTTCGGCGACTCGGGCGGGCCGCACTTCTTGGGCGCTGGCGCGACCGAGACGAGGGTCATCCTCGCGGTGACGGTCACCGGCGATCGCTTCTGTCGCGCGACCGACAAGACGTACCGGCTCGACACGCCTTCCGCGCGGTCGTTCCTCGACGATTTCATCGCTCTTCCGTAG
PROTEIN sequence
Length: 273
MKRITLLAAVGLLTSLALGAFAHAITFGENDNGRHPFVGSLVFEFQGEKSQGCSGTLVSPTVFVTAGHCLFGLEQFGITGVWVTFDEVIDADANGIVDAGVTLHSGTGHVHPDWGFPGLGGNAADPHDVAVFVLAAPVSMTNYGQLPTAGQLNTISKRATRFTTVGYGTVRDDKTRSFKSLELGTRRKMATQEMQSLTTAWVQFSMNPSTGSGGTCFGDSGGPHFLGAGATETRVILAVTVTGDRFCRATDKTYRLDTPSARSFLDDFIALP*