ggKbase home page

PLM3-1_50_b1_sep16_scaffold_1220_20

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(12696..15923)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF5_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 1099.0
  • Bit_score: 1005
  • Evalue 4.00e-290
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 1099.0
  • Bit_score: 1005
  • Evalue 1.10e-290
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 751.0
  • Bit_score: 1315
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3228
ATGACCCCGCGGGACGCCGTTCCCGCCAGCCGCATGGACCCGTCGACATCCGCGCTCTCCGGCCTCGTCCACGAGCTCGCCTCGAGCGAGCGCTTTCGCGCGTTCCTCGCCGACTTTCCCGTGGCCGCCCGCGTCTCCGAGCCCGCGCTTCCGCTCGTGCTCGCCGCGCTGCACGAGGAGCTCGCGCGACCCGTCGTCTGCCTGCTCGCGGAGGACGAAGAGGCGCGGGACACCGCCGAGGCGGTCGCCTGGTACGGCGATCCGACCCGCATCGCGCTCCTCCCGAGCCGCGGCGTTCGTGCGGGATCGGGGCTCGAGCCACCGGCCCATCTCGTCGGCGAACGCGCCCGCGCCCTCGACGTGCTCACAGGTGGCGGATTCGTCTGCGTCTCTGCGCGCGCCCTCGCGGAGGGCATGCCGCCAGTGCACGAGCGTCCCGAGGTCGTGCGCGTCGCGTCGGGTGACGAGCCGGGCATCGACGGACTCGTGGAGGCGCTGACGCTCGCCGGCTACGACCGCGTCGAGCGGGCCGAGGAGCGCGGGCAGATCGCGGTGCGCGGTGGGATCGTCGACGTCTTCCCGAGCACGGGCCGCGAACCTCTTCGCATCGAGCTGTTCGGGGACGAGATCGAGCAGATCCGGGCGTTCTCGCCCTTCACCCAGCGAGCGCTTCATCCTGTCGACGAGGCGGTGATCCATCCCGCGCGCGAGCGGCTCCACGATCCGGAGGAGCTCGAGGAGTCCGCCGAGCTGCCGGACGATCGCGTCCCGCTGCTGGAGAGAGCGCCGGACATCGTCTGGCAGGTCGACGACGTGAGGCAGCTCTGGGAGGAAGAGGGCCTGGAGCCTCAGGCCCTCGACGGCGCGGCCCGGCTCGAGCCGCTCCCACGCTCGCAGCCGCACGTTTTCGAGGCGCAGCGCCCGGCCATCGCCGCGCGCGGGCTCGCCGAAGCCGAGAACGAGCTCGCGGGCATGCTTCGGCAGGGGCGCCGCGTGGTCGTCACGTTCCAGCACCGCGGAGAAGCTCAGCGCACCCAGCGGCTGCTCCGCAAGGTCGACGCTGCCGTGGACGACGACGTCGAGACGCTCCCTTCAGACGCCTCGCTCCGTTTTGTGGTCAGCCCGGCGCGTCGCGGGTTCGTCTGGCGTGACCTCGGCCTCGCGCTCTTGCCGGACGCCCAGGTGTTCCGCAAGCGACCCCCGCGCGCCGACGCGAGGCTCGGCCGGGCGCTGCAGTCGTTCGCCGACCTGCGCACCGGCGACTACGTCGTCCACGAGGATCACGGCGTCGGGAGGCTCCTCGGCTTCGAGACGAAGGAGGTCGCCGGAGTCACGCGCGACTACCTCTACCTCGCGTTCAAGGACGAGGACCGACTCTACGTCCCGCACGAGCAGCTTCCCAAGGTCTCCCGCTACATCGGGGCGGACGCGCGGACGCCGTCCCTCTCGAAGCTCGGTGGGAAGGCCTGGCACAACCTGAAGAGCCGCGCTCGCGCGTCGGTGCGGGAGCTCGCCGGTGAGCTTCTGTCGCTCTACGCGAGGCGGCAGCAGGCGCCCGGTCATGCGCTCGACCTCTCGAGCGACTGGCTCGAGCGCCTCGAGAGCTCGTTCCCGTACCGGGAGACGGACGACCAGCTGCAAGCGATCGAGGCCGTGAAGGAGGACCTCGAGGCCGCCCGGCCCATGGACCGGCTCGTCTGCGGAGACGTCGGCTTCGGGAAGACCGAGGTCGCCGTTCGTGCCGCGTTCGCGGCGGCGCTGAACGGTCGCCAGACGCTCGTCCTCTGCCCGACCACGATCCTCGCCGAGCAGCACTGGAACACCTTTCGGGAGCGCTACCGCGACTTCCCGGTACGGGTGGAGATGGTGTCGCGGTTCCGCTCGAAAGCGGATCAGACGCGGATCCTCGACGAATTCCGGGCCGGGAAGATCGAGGTCCTCATCGGCACGCATAGGATCCTTTCGCGCGACGTCATCCCGCAAAACCTGGGACTCGTCATCCTCGACGAGGAGCAGCGTTTCGGCGTCGCGCAGAAAGAGCTCCTGCGCTCGCTCCGGCTCGAGGTCGACGTTCTCGCGCTCTCGGCGACTCCGATTCCGCGCACCCTCCACATGTCGCTCTCGGGCCTGCGCGACATCTCGATCATCGAGACGCCCCCAATCGGGCGCCGGCCGATTCGCACGACGGTCGGCGAGTACGACGTCGAGCTCGTGAAGACCGCGCTCGAGCGCGAGCACGCACGTGGGGGTCAGGCGTTCTACCTGCACAACCGGGTCGAGTCCATCGACGAAGCGGCGACGAAGCTCGAGCAGCTCTGCCCTGCGCTTCGCTTTCTCGTCGCGCACGGCCAGATGTCGGAGCGCGAGCTCGAGGAGCGGATGCACGCGTTTCTCGCCGGAGATGCCGACGTCCTCGTCTCGACCACCATCATCGAGTCGGGCATCGACATCCCTCAGGCGAACACGCTCGTCGTCGAGCGTGCCGATGCGCTCGGACTCGCGCAGCTCTACCAGATCCGTGGCCGGGTCGGCCGCTCGGATGTCCTTGCGTACGCCTACCTCTTCTACCCGGAGGCGTCGGAGCTCACACCCGAGGCGCGCGCGCGGCTCGCGACGCTCGCGGACCACACGGAGCTCGGTTCCGGATTCCAGATCGCGATGCGCGACCTCGAGATCCGTGGCGCGGGCGACCTACTCGGGCCCGAGCAGTCCGGGCACGTCGCCGCGCTCGGGTTCGAGCTCTACGTCGAGATGCTCGACGAGGCCGTGGCCGAGCTCTCCGGAAGCCGGCGCGTCGTCGCCCGCCCCGTGCGCGTCGACGCTCGCGTCGATGCGTACGTGCCGGCCGCCTACATCGCGGCCGAGGCGCTGAAGATCGACCTCCACCGCAGGATCGCCCTCGTCGAGGGCGAGGACGAGCTCAGGGAGCTCGTCGCCGCGACCGAGGATCGGTACGGGCCACTGCCCGAGCCCGTCGCGAACCTGTTCGCGATCCAGGAGGCGAAGCTGAAGCTCGCTCGCCTAGGCGCCGACTATCTCGTCTACCGCGGGGGGCGTGCGACCGTCGGGCCGCTCGCGCTGGGCTCGGTCGAGGTCCGTGCGCTCATCGGGAAGGAGCCGACGGCGATCTACTCGACGCAGAAGCGCGAGGTCTCGCTTCGGGTCGAGACGCTCGAACGCGCGCTGGAGCTTCCCGATGCTATTGTCCAGGCTCGCTTGGCCGCTTGA
PROTEIN sequence
Length: 1076
MTPRDAVPASRMDPSTSALSGLVHELASSERFRAFLADFPVAARVSEPALPLVLAALHEELARPVVCLLAEDEEARDTAEAVAWYGDPTRIALLPSRGVRAGSGLEPPAHLVGERARALDVLTGGGFVCVSARALAEGMPPVHERPEVVRVASGDEPGIDGLVEALTLAGYDRVERAEERGQIAVRGGIVDVFPSTGREPLRIELFGDEIEQIRAFSPFTQRALHPVDEAVIHPARERLHDPEELEESAELPDDRVPLLERAPDIVWQVDDVRQLWEEEGLEPQALDGAARLEPLPRSQPHVFEAQRPAIAARGLAEAENELAGMLRQGRRVVVTFQHRGEAQRTQRLLRKVDAAVDDDVETLPSDASLRFVVSPARRGFVWRDLGLALLPDAQVFRKRPPRADARLGRALQSFADLRTGDYVVHEDHGVGRLLGFETKEVAGVTRDYLYLAFKDEDRLYVPHEQLPKVSRYIGADARTPSLSKLGGKAWHNLKSRARASVRELAGELLSLYARRQQAPGHALDLSSDWLERLESSFPYRETDDQLQAIEAVKEDLEAARPMDRLVCGDVGFGKTEVAVRAAFAAALNGRQTLVLCPTTILAEQHWNTFRERYRDFPVRVEMVSRFRSKADQTRILDEFRAGKIEVLIGTHRILSRDVIPQNLGLVILDEEQRFGVAQKELLRSLRLEVDVLALSATPIPRTLHMSLSGLRDISIIETPPIGRRPIRTTVGEYDVELVKTALEREHARGGQAFYLHNRVESIDEAATKLEQLCPALRFLVAHGQMSERELEERMHAFLAGDADVLVSTTIIESGIDIPQANTLVVERADALGLAQLYQIRGRVGRSDVLAYAYLFYPEASELTPEARARLATLADHTELGSGFQIAMRDLEIRGAGDLLGPEQSGHVAALGFELYVEMLDEAVAELSGSRRVVARPVRVDARVDAYVPAAYIAAEALKIDLHRRIALVEGEDELRELVAATEDRYGPLPEPVANLFAIQEAKLKLARLGADYLVYRGGRATVGPLALGSVEVRALIGKEPTAIYSTQKREVSLRVETLERALELPDAIVQARLAA*