ggKbase home page

PLM3-1_50_b1_sep16_scaffold_10861_7

Organism: PLM6_50_b1_sep16_Actinobacteria_68_8

near complete RP 47 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(2675..4459)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, permease component Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K8Y3_HALHC similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 270.0
  • Bit_score: 239
  • Evalue 7.40e-60
sn-glycerol-3-phosphate transport system permease protein UgpE {ECO:0000313|EMBL:EYR80277.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.6
  • Coverage: 585.0
  • Bit_score: 240
  • Evalue 6.10e-60
ABC-type sugar transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 270.0
  • Bit_score: 239
  • Evalue 2.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
ATGAGGAGCGCGACCGAGACTGTCCCTGCCCCCAAGCGTGGCTCCGTCTTCGGTGTGCGCATGCGCGAAGCCGGTTGGGGCTACGCGTTCGTCCTGCTCCCGATGGCCGTCTTCGGACTGTTCTTCATCTACCCGCTCGTCTACGGGGTCTACATCAGCTTCTTCGAGTGGGGAATCCTCGGCAAGGCGCCGGGCGCAACCGCCAGCACGCAGAACTACCACATCCTCTACCACGACCAGGTCTTCCATCGCGCCTTACGGAACACCTTCGAGTTCGCGCTCCTCGTCGTGCCGCTCGAGATGGCGCTCGGGCTCCTGGTCGCCCTCGTGATCAACGCGAAGATCCGCGGGCGGGCGTTCTTCCGCTCGGCCTTCTACTTCCCGTCGATCGCCTCGTCGGCCGCGATCACCACGATCGCGATCTTCATCCTCAACCCCGACGGGCTGCTGAACAGGATCATCGGCAGCAACCAGGCGTGGTTCGGTGATTCGAGTACTGCGCTCTACTCCGTCGTGGGGCTGAACGCCTGGACGACGTCCGGCACCGTCATGCTCTTCTACCTCGCGGCGCTCCAGTCCATTCCAACGGACGTCTACGAGGCGGCGGCGGTCGACGGGACGGGTGCGTGGCGCACGTTCTGGCGGATCACGTTCCCTCAAGCCGGCGCACTTCTTCGTGCTCGTCGTGTTCGGCATCGGCGCACTCAAGGTCTTCGACCAGTTCTACATCGTCTCCCAGGGGACTGGCGGCCCCGAGTACTCGACACTGAGCGCCGTCTTCTACATCTACCAGGAGGCGTTCAAGAGCGCGAACTTCGGGGTCGGCGCCTCGGCGGGCGTCGTGCTCTTCGTCGCCATCTTCCTTCTCACGCTGCTCCAGCGCGCGACGGTCGGACGGGCGGAGATCGGCTGATGCTCCAGACGTCCGTCGCAGCGGCCGAGCCTTTCGTTCCCCCGCAAGCGAGGTCGGCGGCCGTCCGGAGGATCGTCCTCTACGTCCTGCTCGTCGCCTTCGCACTGCTCTTCTTCACGCCGTTCGTCTGGACCATCTCGACGTCGTTCAAGACGTTGCCGGACAGCGCGTACTTCAACTTGATCCCGCACCCGTTCACGACGGAGGCCTGGAAGAGCGTCTGGAACGACTACGACTTCAAGCGCTACGCACTGAACAGCCTCTTCCTCGCGGTCACGGTCACGCTTCTGAACCTCTTCCTCGCGTCCCTCGGCGGCTACGCCTTCGCGCGCCTGCGCTTCCCGGGCCGGGAGGTCCTCTTCCTGATCATCCTGGGGACGCTGATGATTCCCGATCAGCTGCGCCTCATCCCGGTCTTCGTGATGCTCACGAACTGGCACCTCATCGGAAACTTCTCGGGCTACATCCTGATCAACCTGGTGACGGCAGTGAACCTCTTCTTCATGCGGCAGTACTTCCTCACCATTCCCCGGGACTTCGAGGAGGCGGCAAAGCTCGACGGCGCGGGCTACTTCAAGACGTATTGGCGCATCATGCTCCCGCTCGCCGGCCCCGCGATCGCGGCGCTCGCGATCCTCCAGTTCCAGGGGACCTGGAACGACTTCTTCTGGCCGCTCATCCTCTTCGGGCAGGGCAGCGAGCACATGTACACGATGCAGCTCGGCCTCGCCCAGCTCACCTTCACCTACCAGTCGCTGTGGCCCCAGTTGATGGCCGGGAGCATCATGGCGATCGCTCCGATCCTCGTCATCTTCCTCATCTTCCAGCGCTTTTTCGTCTCAGGTGTCACCGCCGCGGGGATCAAGGGATGA
PROTEIN sequence
Length: 595
MRSATETVPAPKRGSVFGVRMREAGWGYAFVLLPMAVFGLFFIYPLVYGVYISFFEWGILGKAPGATASTQNYHILYHDQVFHRALRNTFEFALLVVPLEMALGLLVALVINAKIRGRAFFRSAFYFPSIASSAAITTIAIFILNPDGLLNRIIGSNQAWFGDSSTALYSVVGLNAWTTSGTVMLFYLAALQSIPTDVYEAAAVDGTGAWRTFWRITFPQAGALLRARRVRHRRTQGLRPVLHRLPGDWRPRVLDTERRLLHLPGGVQERELRGRRLGGRRALRRHLPSHAAPARDGRTGGDRLMLQTSVAAAEPFVPPQARSAAVRRIVLYVLLVAFALLFFTPFVWTISTSFKTLPDSAYFNLIPHPFTTEAWKSVWNDYDFKRYALNSLFLAVTVTLLNLFLASLGGYAFARLRFPGREVLFLIILGTLMIPDQLRLIPVFVMLTNWHLIGNFSGYILINLVTAVNLFFMRQYFLTIPRDFEEAAKLDGAGYFKTYWRIMLPLAGPAIAALAILQFQGTWNDFFWPLILFGQGSEHMYTMQLGLAQLTFTYQSLWPQLMAGSIMAIAPILVIFLIFQRFFVSGVTAAGIKG*