ggKbase home page

PLM3-1_50_b1_sep16_scaffold_520_27

Organism: PLM6_50_b1_sep16_Chloroflexi_RIF-CHLX_69_8

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(23440..24141)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 180.0
  • Bit_score: 177
  • Evalue 1.40e-41
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 184.0
  • Bit_score: 97
  • Evalue 2.90e-18
Tax=GWC2_RIF_CHLX_73_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 180.0
  • Bit_score: 177
  • Evalue 1.90e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 702
GTGAGACGGAACGGCTCGGCTGTCCTCCTCCTGACAGTCGAGCCGGGCGGGATAGTATCCGAATCCGTCAAGCCGCGCGCGGCCGGATTGTCGCTGGAGGACGCCCTGGGACAGGTACGCTCCGCCGGGCATCTACCTAGCATGACGGACATCCTGCTGGGCGACGGAGCGGCGCTCGAGGCGACGGTCCGATCGGCCGCCACCGGTGACGAGGCCGCGTTCGCTCGTCTCGTGGCCGACCATCACGCGTCCATGATTCGGGTCGCCTACGTCATCTCCGGCGATGCGGATACGTCGCTCGACGCGGTGCAGTCCGCGTGGGCGATCGCGTGGCGGCGCATGAGGTCGCTCCGCGATCCGTCCCAGGTCCGCGCGTGGCTGGTGGCCATCGCCGCGAACGAGGCGCGCCAGGCCGTGCGCCGGCGACGGCGAGAGCGGGTCGTCGATATCTCGGAGGACATCGCCCGCGCGGAGAGCGGCCACGTGGAGGACGCCGCCGATGTCGCCGATCTCGATCGCGCGCTGCGGGGTTTGAAGGCCGAGGACCGCAGCCTCCTAGCGCTGCGCTACGCGGCAGGACTCGACAGCTCGGAGATCGCACGGCAGATGGGCATGTCCCCGTCCGGCGTCCGGAGCCGGCTCGCCCGGCTCCTCGAGCGGCTCCGGGACGATCTCGCACTCGAACCGGAGATCGACAGATGA
PROTEIN sequence
Length: 234
VRRNGSAVLLLTVEPGGIVSESVKPRAAGLSLEDALGQVRSAGHLPSMTDILLGDGAALEATVRSAATGDEAAFARLVADHHASMIRVAYVISGDADTSLDAVQSAWAIAWRRMRSLRDPSQVRAWLVAIAANEARQAVRRRRRERVVDISEDIARAESGHVEDAADVADLDRALRGLKAEDRSLLALRYAAGLDSSEIARQMGMSPSGVRSRLARLLERLRDDLALEPEIDR*