ggKbase home page

PLM3-1_50_b1_sep16_scaffold_41_12

Organism: PLM6_50_b1_sep16_Chloroflexi_RIF-CHLX_69_8

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 11256..11822

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Chloroflexi_73_18 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 185.0
  • Bit_score: 219
  • Evalue 2.50e-54
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 174.0
  • Bit_score: 125
  • Evalue 1.40e-26
Tax=RBG_16_RIF_CHLX_70_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 186.0
  • Bit_score: 237
  • Evalue 9.50e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 567
GTGGACGCGGCGCGGGCTGATCCCGCGCGGTTCGACCCGCTGTACCGGAAGTACGTTGCCCAGGTGTACAACTACGCGGTCTACGAGCTCGGCGACCACCACGAGGCCGAGGATGCGACGGAGCGGACGTTCCTGTCCGCGCTGGCCGGACTCCCGCGCTTCCAGGAGCGCGCCACACCGGACGACGGTGAGGGGGCCTCGACGTTCCGCATCTGGCTGTTCCGGATCGCCCGCAACGTCGTCGCCGAACGGCGTCGGCGCTGGCGTCGCCGACCCGAGGCACCACTCGACGTCGCCACGGACGCTCCCGCGCCTGGCGACCTCGAGGGAGCCGTCGTGGCACGCGAATCGGCGGCGTCGGCGCTGCGCGCCGTCGAGCGGCTCCCGGGTGATCGGCGACGGGCCGTCATGCTCCGGTTTGTCCACGAGATGTCGACGTCCGAGATCGCCGAAATCCTGGGCCGCTCGGAGGGAGCAGTTCGGGTGCTGATCCATCGCGGCTTGCGTGGCCTCGCGAGGGAGCTGGGCGAGGAATCGCCCGGGACATCCCGCAAGGGGAGGGCGTGA
PROTEIN sequence
Length: 189
VDAARADPARFDPLYRKYVAQVYNYAVYELGDHHEAEDATERTFLSALAGLPRFQERATPDDGEGASTFRIWLFRIARNVVAERRRRWRRRPEAPLDVATDAPAPGDLEGAVVARESAASALRAVERLPGDRRRAVMLRFVHEMSTSEIAEILGRSEGAVRVLIHRGLRGLARELGEESPGTSRKGRA*