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PLM3-1_50_b1_sep16_scaffold_1315_6

Organism: PLM6_50_b1_sep16_Chloroflexi_RIF-CHLX_69_8

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3774..4349)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Chloroflexi_73_18 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 171.0
  • Bit_score: 129
  • Evalue 2.60e-27
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 186.0
  • Bit_score: 106
  • Evalue 6.80e-21
Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 176.0
  • Bit_score: 164
  • Evalue 1.40e-37

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Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGGCAGATTCCGCAGTACGCCGTGGAATTCGAACCTGTGGCGCCCGCTATGGGTACGAGGGACGACGCGCTGGTCTCGCGCGCGCGCCGTGGCGACCGTGACGCATTCGCCCTGCTCATCGAGCCGCGGGCCACGCGCCTGCTCCGCACCGCCCGCGCCATCCTTGGCAACGAGGCAGACGCATACGAGTCGGCCCAGGAAGCGCTGATCGCTGCCTGGATTCGGCTGCCCGGGCTACGCGATGCCGATCGGTTCGACGCCTGGCTGAACCGGACCCTCGTGAACAAATGTCGGGACGCGCTCCGCAAGCGGAAGCGCGTCCGCGAGATCGATATCGGCGGATCCGAGCTCGAGGCACCGGACACCGCCGATACCCATGCCGCCCAGGCGTCGGTCGTCGCGGCGTTCGACCGCCTGTCGGTCGACGCGCGCCACATCCTCGTCCTGCACCACCTCCAGGACGTGCCCTTGGCGGAGGTCGCCAGCCAACTGGGGATACCGATCGGGACCGCCAAGTCTCGCCTGTGGAGCGCGCGGCGTGCCCTGGAGCGCGCCATGGAGGCCGAATCATGA
PROTEIN sequence
Length: 192
MRQIPQYAVEFEPVAPAMGTRDDALVSRARRGDRDAFALLIEPRATRLLRTARAILGNEADAYESAQEALIAAWIRLPGLRDADRFDAWLNRTLVNKCRDALRKRKRVREIDIGGSELEAPDTADTHAAQASVVAAFDRLSVDARHILVLHHLQDVPLAEVASQLGIPIGTAKSRLWSARRALERAMEAES*