ggKbase home page

PLM1_30_b1_sep16_scaffold_847_14

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(11404..11724)

Top 3 Functional Annotations

Value Algorithm Source
Cupin 2, conserved barrel bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 105.0
  • Bit_score: 88
  • Evalue 2.90e-15
cupin similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 104.0
  • Bit_score: 83
  • Evalue 3.40e-14
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 100.0
  • Bit_score: 89
  • Evalue 3.10e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGGAGCGAACCAGGCTGGCCGAGCTGATCGCCTTCGACGAGCGGCGCATGGCCAAGCACCGGGTGTTCGAGACCGACCGCACCCTGACCGACCTCTACTGCCTCGACCCCGGGCAGGAGCAGCTGCTGCACGTCCACGACGACGCCGACAAGGTGCTGGTGGTGATGGCTGGCCGGGTGCTGGTCCGGGTCGACGACGACACCGCCGAGGCCGGGCAGTACGAGGCCGTCCTGGTCCCGGCCGGGTCCAAGCACGCCCTCAAGAACCTCGGCCCCGACCCGGCCGTGCTGCTGGTCTTCGTCGGCCCCCGCCTCGCCTAG
PROTEIN sequence
Length: 107
MERTRLAELIAFDERRMAKHRVFETDRTLTDLYCLDPGQEQLLHVHDDADKVLVVMAGRVLVRVDDDTAEAGQYEAVLVPAGSKHALKNLGPDPAVLLVFVGPRLA*