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PLM1_30_b1_sep16_scaffold_2233_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1218..1346

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 41.0
  • Bit_score: 60
  • Evalue 2.50e-07
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 41.0
  • Bit_score: 60
  • Evalue 7.20e-08
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 41.0
  • Bit_score: 60
  • Evalue 3.60e-07

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 129
GTGCTGTGGCGGGAGCTGCAGCCGGCCGTACTGCGTTACTTCCGGGTGGCCGCGGGGGAGGCGGCCGAGGACCTGGCCGCCGACACCTGGGTGTCGGTGATCGGTGGGCTGAGGCGGTTTCCGGGGTGA
PROTEIN sequence
Length: 43
VLWRELQPAVLRYFRVAAGEAAEDLAADTWVSVIGGLRRFPG*