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PLM1_30_b1_sep16_scaffold_1611_7

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4758..5420)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 Tax=Nocardiopsis potens RepID=UPI000375A8A9 similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 211.0
  • Bit_score: 187
  • Evalue 1.20e-44
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 207.0
  • Bit_score: 183
  • Evalue 3.90e-44
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 214.0
  • Bit_score: 183
  • Evalue 1.90e-43

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Taxonomy

Nocardiopsis dassonvillei → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGTCCGAGTACAAGCTGGCCGCCGAGAACCGCTCGGACGCCGGGAAGGGGGTCGCCCGCCGGCTGCGGGCCACCGGCCGGGTCCCGGCCGTGCTGTACGGCCACGGCACCAAGCCCCAGCACCTGAGCGTCGACGCCCGCCAGCTCGGCCAGGCCCTGCGAACCGATGCCGGCGCCAACGTGCTGATCTCGCTGGAGGTCGGGCGCGACAAGCACCTGGCCCTGGCCAAGGAGATCCAGCGGCACCCGGTCAGGGGCGACTTCATCCACGTCGACTTCCTCCAGGTCCGCCGGGGCGAGAAGGTCCACGTCCAGGTGTCGGTGCGCCTGGTCGGGGAGGCGCCCGGGGTCCGCGAGGGCGGCATCGCCGACCAGGACCTGTACCAGCTCAACGTCGAGGCCGAGGTGACCGCCGTGCCCGAGGCGATCGAGGCCGACGTGTCCGGCCTGGCCATCGGTGACGTGCTGCGGGTCGCCGACCTCAAGGCTCCCGGCGGCGCCGTCATCCTCGACGACCCCGAGGCCGTGGTCGTGTCCGTGGCCGCGCCGACGGTCGAGGCCGAGCCCGAGCCCGCCGAGGGCGAGGAGGGCGAGGCCGCCGAGGGTGGCGAGGGCGCCAGCGCCGAGGACGCCGGCGAGGGCGAGGACCGGTCCGAGGCCTAG
PROTEIN sequence
Length: 221
MSEYKLAAENRSDAGKGVARRLRATGRVPAVLYGHGTKPQHLSVDARQLGQALRTDAGANVLISLEVGRDKHLALAKEIQRHPVRGDFIHVDFLQVRRGEKVHVQVSVRLVGEAPGVREGGIADQDLYQLNVEAEVTAVPEAIEADVSGLAIGDVLRVADLKAPGGAVILDDPEAVVVSVAAPTVEAEPEPAEGEEGEAAEGGEGASAEDAGEGEDRSEA*