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PLM1_30_b1_sep16_scaffold_2167_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1888..3567)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SE79_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 560.0
  • Bit_score: 446
  • Evalue 2.90e-122
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ82806.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 560.0
  • Bit_score: 446
  • Evalue 4.00e-122
putative RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 590.0
  • Bit_score: 288
  • Evalue 3.70e-75

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Taxonomy

Aeromicrobium marinum → Aeromicrobium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1680
ATGGGCGTCCGACCTCGTCCCGACGCGCGCGATGACGCCGAGCTCGTGCGGGCGGCGACGGCCGGCGACCGCGGCGCCTTCGCCGCGATCTACGACCGCTACGCCGACCGCCTGCACGACTTCTGCTGGTCGGTGCTGCGCGACCGCGACGAGGCGGCCGACGCCACCCAGGACGCGTTCCTGGTCGCGGCCGAGCGCCTCGGCCAGCTCCGCGACCCGGAGCGTCTCCGCCCCTGGCTGTACGCGGTCGCCCGCAGCCAGGCCCTCCGCCGGGCCAGGGCCCGATCGCGCCTCGCCCCCGAGGAGGACATGACCGACCTGCCCGACCCCGCCACCGGCCCCGAACAGGCCGCCCAGCGCGCCGACCTCCGTGAGCTGGTCTGGAACGCCGCCGCCGGCCTGTCCGAACGCGACCGCGCCCTCCTCGACCTCCACCTCCGCCACGGCCTCGAGGGCGCCGACCTGGGCGAGGCCATCGGCGTCGAGCCCGCCCACGCCTACGTCCTCCTGACCCGTCTCCGCGACCAGGTCGAGCGCTCCCTCGGCGCCCTCCTCGTCGCCCGCCTCGGCCGCGCCGACTGCCCCGACCTGTCCCGCCTGCTGACCGACTGGGACGGCCGGTTCTCCCCCCTCGTCCGCAAGCGGGTCGCCCGCCACGTCGACAACTGCGAGACCTGCGGCGCCGCCCGCCGCAAGCTCGCCAGCCCCCTGGCCCTCCTGGCGGCCGTCCCCCCCATGCCAGCCCCAGCCGACCTCAGGGGCCGGGTGCTGGAGCAGTTCCAACTCGCATCCGCGGGTTCGGGTGGTGCGGGTGACCCGGGCGCGGCCCAACCCCAGGCCGGAACGGCTGGCCCCCCGGAGGGGGAGGGTAGCGTCGCGGCGATGTTGCTGAGCGTCGGGGTGGGAGTCGGGCTGGGATGGGAGCGGTCGCCGGCCGAGTCCAGCCCCTCCGACGACCAGGGCGGCGGCCCGGTGGTGGCCGGGGCGGCCACCTCGACCGCCCCGACCTCGACGCCGACGACCGCGGCGCCTTCGACCTCGACCAGCACCTCGACCTCGGTCACGACCAGCACCACGACCCCGCCCCCGGCGGCGCCGCCCTCGCTGACCGTCTCCCCGGCCAGGGTCGACCTCGGCTCCGCCGGCACCAGCGCCACCCTCACGGTCCGCAACGGCGGTGACGAGCCCCTCTCGTGGGCGGCCGCCCCCTCGACGCCCTGGCTGCGGGTGCGCCCGTCCAGCGGCCGTCTCGACGGCGGCGAGCAGGCCAGGCTCAGCCTGTCCGCGACCCGCGACGGCCTGCCCGAAGGCGACGCCGACGCCCGGGTCGAGCTCACCTGGGGCGGCGCCGCCCGCTCGGTCGCCGTCGCCCTGCGGATCGAGCACCCTCCCGAGATCAGTGACCTGGGGGCCTCGCCGCCCCAGATCGCCGTCGCCCCTTGCGTTCCCACCACCACCCTGGTCGGCGCCACCGTGACCGACGAGTCGGGCCTCTCGTCGGTGACCCTGCGCTGGGGCGGCCAGTCGGTCCCCATGACCCAGCGGGACGGACGCTGGTTCGCCAGGCTCGGCCCCGTGGCCAGCCCGGGCACGGTGTCCTGGCAGGTCGTCGCCACCGATTCCCGGGGCAACACCGCCTCGGCGTCGGGCCCGCCAGTTCGCGTGCTCGCCTGCCGGTAA
PROTEIN sequence
Length: 560
MGVRPRPDARDDAELVRAATAGDRGAFAAIYDRYADRLHDFCWSVLRDRDEAADATQDAFLVAAERLGQLRDPERLRPWLYAVARSQALRRARARSRLAPEEDMTDLPDPATGPEQAAQRADLRELVWNAAAGLSERDRALLDLHLRHGLEGADLGEAIGVEPAHAYVLLTRLRDQVERSLGALLVARLGRADCPDLSRLLTDWDGRFSPLVRKRVARHVDNCETCGAARRKLASPLALLAAVPPMPAPADLRGRVLEQFQLASAGSGGAGDPGAAQPQAGTAGPPEGEGSVAAMLLSVGVGVGLGWERSPAESSPSDDQGGGPVVAGAATSTAPTSTPTTAAPSTSTSTSTSVTTSTTTPPPAAPPSLTVSPARVDLGSAGTSATLTVRNGGDEPLSWAAAPSTPWLRVRPSSGRLDGGEQARLSLSATRDGLPEGDADARVELTWGGAARSVAVALRIEHPPEISDLGASPPQIAVAPCVPTTTLVGATVTDESGLSSVTLRWGGQSVPMTQRDGRWFARLGPVASPGTVSWQVVATDSRGNTASASGPPVRVLACR*