ggKbase home page

PLM1_30_b1_sep16_scaffold_1373_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 2..187

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor Tax=Streptomyces collinus Tu 365 RepID=S5UMD4_STRCU similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 54.0
  • Bit_score: 69
  • Evalue 8.00e-10
sigma factor similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 54.0
  • Bit_score: 69
  • Evalue 2.30e-10
Sigma factor {ECO:0000313|EMBL:AGS66941.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 54.0
  • Bit_score: 69
  • Evalue 1.10e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces collinus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 186
CTGCCGGACCGCCAGCGGGCCGTCCTGGTGCTGCGCTACCACGAGGACCTGCCCGAGGCCGAGGTTGCCCGGCTGCTCGGCCTGCCCCTGGGCACGGTGAAGTCGCTGGCCCACCGCGGGCTGGCCCGGCTGCGGGGCCAGCTTGGCTCGCCGGCAATGGAGGAGATCAGGGGGAACCAGCAATGA
PROTEIN sequence
Length: 62
LPDRQRAVLVLRYHEDLPEAEVARLLGLPLGTVKSLAHRGLARLRGQLGSPAMEEIRGNQQ*