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PLM1_30_b1_sep16_scaffold_718_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(3185..3766)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family Tax=Frankia sp. CN3 RepID=G6HKX0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 196.0
  • Bit_score: 264
  • Evalue 7.00e-68
Putative transcriptional regulator {ECO:0000313|EMBL:KJE20432.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 199.0
  • Bit_score: 265
  • Evalue 5.70e-68
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 189.0
  • Bit_score: 261
  • Evalue 9.80e-68

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAGCGTTCGCCACGCGCTGCTGGCCCTGCTGACCGAGGGCCCGAAGTACGGCCTACAGCTGCGGCAGGAGTTCGAGTCGAGAACGGGCGAGGTCTGGCCGCTCAACGTGGGGCAGGTCTACACCACCCTGCAGCGCCTGGAGCGTGACGGGCTGGTCGAGTCCGACGACCCGGAGGGTGATGGCCCGCAGAAGGGCTTCCGGATCACTCCGGCCGGTGGCCAGGAGCTTGCCGAGTGGCTGCACACCCCGCCCGGTACGGTGGCACCGCCCCGTGACGAGCTGGTCATCAAGGTGCTGGTGGCGATCTCCGTGCCCGGGGTCGACGTGCACGAGCTCATCCAGGTCCACCGCCGCCACCTCGTCGAGCTGATGCAGCACTACACCTATGTGAAGGCTGAAGCCGCCGAGCACGACGTGGGGCTGGCCCTGGTCGTCGACGCCGAGCTGTTCCGCCTCGAGGCGGTCGTACGCTGGCTGGACGCGGCCGACACCCGACTGACCAGCCTTCCGGCGGCCAGCCCGGTGGCGGCTCCCGCCGTGCCGGCCCGGCGACGACACCGGCTGGAGGTCAGGCGATGA
PROTEIN sequence
Length: 194
MSVRHALLALLTEGPKYGLQLRQEFESRTGEVWPLNVGQVYTTLQRLERDGLVESDDPEGDGPQKGFRITPAGGQELAEWLHTPPGTVAPPRDELVIKVLVAISVPGVDVHELIQVHRRHLVELMQHYTYVKAEAAEHDVGLALVVDAELFRLEAVVRWLDAADTRLTSLPAASPVAAPAVPARRRHRLEVRR*