ggKbase home page

PLM1_30_b1_sep16_scaffold_820_8

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(5244..6158)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic solute binding protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y446_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 299.0
  • Bit_score: 352
  • Evalue 2.30e-94
Manganese ABC transporter {ECO:0000313|EMBL:ETK34190.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 304.0
  • Bit_score: 354
  • Evalue 8.70e-95
periplasmic solute binding protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 299.0
  • Bit_score: 352
  • Evalue 6.60e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGGCCGGCGACGAGGTGGGCTGCTGGCGGCCTGCCTGGTGGCCGTGCTGGCGGCCGGCTGCTCGGGGTCGGGCGGCGACCGCGACAGCGGGGGTCCGGGGCTGCGGGTGGTGGCCACCACCACCCAGGTGGCCGACCTGGCGGCCAACGTCGGCGGCGACCGGGTCCGGGTGACCAGCCTGCTCAAGCCGGGCATCGACGCCCACGACTACGAGCCGTCCCCGGCCGACATCGACGCCATCGCCCACGCCGACCTGGTCCTCGAGAACGGGGTCGGCCTGGAGCGGTGGCTGGGCGACACCATCGAGAACTCCGGCTACGACGGCCCGGTGGTCGACACCAGCCAGGGGGCGGCGCTGCGCCGGGTCGACGGCGAGCCCGACCCCCACATCTGGCAGAACCCGCGCAACGCCCAGCGGATGGCGGCCAACATCGAGCGCGGCCTTGCCACCGCCGAGCCGGCCGCGACGGGAACCTTCGAGGCCAGCCTGGCCGCCTACACCAAGAAGCTGGAGGCGCTCGACGCCGAGGTCGAGCGGCAGACGGCCAGCCTGGCCAGCCGAAAGGTGGTCACCAACCACGACGCCTTCGGCTACTACCTGGACCGCTACCACCTGGAGCTGGTCGGTTCGGTCATCCCAAGCTTCGACAGCTCGGCCGAGCTGTCGGGCCGCGACATCCGGGACCTGGTGGCCAGGATCCGGGCGACCGGGGCCAGGGCCATCTTCTCCGAGACCTCGCTGCCGCCGCGAGCGGCCGAGACGATCGGCCGCGAGGCCGGGGTCAGGGTGGTCACCGGCGAGGGTGCGCTGTACGGCGACTCCCTCGGCCCGCCCGGGTCGGACGGCGACACCTACCTCAAGATGATCCGGCACAACACGGCCACGATCGTGAGCAACCTCAGTGGCGCCTGA
PROTEIN sequence
Length: 305
MGRRRGGLLAACLVAVLAAGCSGSGGDRDSGGPGLRVVATTTQVADLAANVGGDRVRVTSLLKPGIDAHDYEPSPADIDAIAHADLVLENGVGLERWLGDTIENSGYDGPVVDTSQGAALRRVDGEPDPHIWQNPRNAQRMAANIERGLATAEPAATGTFEASLAAYTKKLEALDAEVERQTASLASRKVVTNHDAFGYYLDRYHLELVGSVIPSFDSSAELSGRDIRDLVARIRATGARAIFSETSLPPRAAETIGREAGVRVVTGEGALYGDSLGPPGSDGDTYLKMIRHNTATIVSNLSGA*