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PLM1_30_b1_sep16_scaffold_3158_5

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 3745..4824

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 components-like Tax=Frankia sp. (strain CcI3) RepID=Q2J7T0_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 386.0
  • Bit_score: 186
  • Evalue 2.60e-44
Type IV secretory pathway VirD4 components-like protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 386.0
  • Bit_score: 186
  • Evalue 7.50e-45
Type IV secretory pathway VirD4 components-like {ECO:0000313|EMBL:ABD12662.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 386.0
  • Bit_score: 186
  • Evalue 3.70e-44

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Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGTGGCGTGACCGCGACCGCTATCCCGAGCACAACCTGGTTCCTGACACCTTCTGGCTTCTTATCGCGGTGCTGCTGTTCGCCGCCTGCGGGCTGGTCTGGGTGATCGGCCAGGTCGCCGCCATCGTCCTCGGGCCCCTCCACCAGCACCTCCCCGTGCGGCTGGTCGACATGCTCGGCGTCCTCCTTCGCCTGCCCGGCACCTGGGACGATCCAGCCCAAGCCTGGCCACCCTCCAGCCAGCCGCTACTGCCGGGCCCGGTGGGCATGTACGCCGCCGCCGTCCTCACCTTCTGGCTCCCCGCCCTGGCCTACGGGCTGCTGGTCCGGCTGGTCTCCCCGCGCGCCCGCCGCAGACGACGGCAGCGCGGAGCGCGATGGGCGAGCTGGTGGCAGCTGCGTCGGCTGCTCGTGATCGGGCCCAGGCGAGGGCGGATCATCCTCGGCCGCCGCGACCGCATCAAGGATCGCCTCCTCGGCCGCCTCTACCTGGCCGTCGAGCAATGCCACTCGGTCCTGGCCTTCGGCCCCCCCGGATCCTTCAAGACCCACGGCCTGGTCATCCCGGCGATCTTGGAATGGCAGGGCAACCTGGTTACCACCTCCATCAAGCCCGATGTGCTGCGGGCCACCTGCGCCCATCGGGCCAGCCTCGGGGCCGTCTGGGTCTATGACCCCCTCGGCCTGTCCGGTGTGCCGGGAGCCAGGTGGACCCCCCTCGCCTACTGCCACAGCTACGCCGACGCAAGGCGGATCGGCCGCATGCTGGCCGAGGCCGCCGACGTCCAGGGCCACAAGGGCGATGACGCCAACTACTGGCAGCTGCTGGGCGCCAAGCTCCTGTCGGTGCTGCTGTTCGCCGCCGCCGGGACGGGGCGGTCGATGGCCGATGTCGCCCGGTGGGTCGACGTCCAAGACGTCGACGACGTCGCTCAGGCGCTCATGGAGATCGGCAACCAGCAGGCCCTGGATGCCTGGGCGGCCTGCACCAGCCGCCCCGACAACACCATGGGCAGCGTCTACGGCACCGCCGAGACCCTCCTGGACGTCTACGGCGACCCGCAGATCGCCGCCTCCGCT
PROTEIN sequence
Length: 360
MWRDRDRYPEHNLVPDTFWLLIAVLLFAACGLVWVIGQVAAIVLGPLHQHLPVRLVDMLGVLLRLPGTWDDPAQAWPPSSQPLLPGPVGMYAAAVLTFWLPALAYGLLVRLVSPRARRRRRQRGARWASWWQLRRLLVIGPRRGRIILGRRDRIKDRLLGRLYLAVEQCHSVLAFGPPGSFKTHGLVIPAILEWQGNLVTTSIKPDVLRATCAHRASLGAVWVYDPLGLSGVPGARWTPLAYCHSYADARRIGRMLAEAADVQGHKGDDANYWQLLGAKLLSVLLFAAAGTGRSMADVARWVDVQDVDDVAQALMEIGNQQALDAWAACTSRPDNTMGSVYGTAETLLDVYGDPQIAASA