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PLM1_30_b1_sep16_scaffold_3908_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(880..2268)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Nocardiopsis valliformis RepID=UPI00034A88EB similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 427.0
  • Bit_score: 366
  • Evalue 3.10e-98
Transposase {ECO:0000313|EMBL:KJE19276.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 439.0
  • Bit_score: 439
  • Evalue 3.10e-120
DNA-cytosine-5-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 430.0
  • Bit_score: 354
  • Evalue 3.50e-95

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
ATGGAAGCTGAAGGGCGAAGAGCAGTAGTACGGCGGCGCACCTACGCCGCTCGAGTTTATCCCACGCCGGCGCAGGCGGCGTTACTGCATCGGCAGGGACACACTGCGCGGGCTCTTTGGAACCTGCTGCACAGCTGGTACACCTGCCGCGACGGCGGAATTGCCAGTCGTCCTTCGATCGCCGAAATCGACCGCCAACTGCGCGACGCCCGAGCCGACCCGCTTCCCGGCTGGGAGTGGCTGGCTGAGTTACCTTGCCAGGCCACCCAACAAGTTCTCAAGCATTACCTTCGTGCGTGGGATCACTTCCAGAAGGGTCTTGCGCGCCCGCCCAAGGTCAAGAAGCGGAGCGCCCGGCTCGCTATTGATGTTCCGCAGGCTTCAAAACTTCGCGTCACCCGCCTGAGCCGCCGCTGGGGTGAAGCAGCGATTCCGCTTATCGGTCGTGTCCGGTTCCGCTGGACTCGTCCCCTACCAGGAATTTCCCGCGGCTGCCCTGGCCGGATCACTGGCGCTCGGCTGATCAAGAACCCTCTCGGTTGGCACATCGCGTTCCGCGTCGAGGATGCGGCGTCCGCAGTGCCTACGAATTCTTGTCCTCCAGTAGGAATTGACCGCGGCGTCGCCCACACGATGGCGTTGTCAGACGAGCGATATCTCGACATGCCCCCGCTGCTTAGCGAGAAAGAGCAGCGCCGGTTACGGAAACTGGAGCTACAAGCCGCGCGGCGGCGGGCTAGTCGTAAACCTGGTGCGGCCATGTCGAACCGGGAGCGGAGAACCTACGACCAGATCGCCGCGCTGCGAGCTCGTCAGGCCCGCCGGCGCGAAGATTGGCTACACAACAAGACGACTGAACTATCCAGAAATCATAGCCTCATAGCGATTGAAGATCTACGCATCAAGAACATGACCCGCTCACCCCGCGGCACAGTCGACCGTCCGGGAAGACAGGTCCGAGCCAAAGCCGGCCTGAACCGCTCGGTTCACTCCATGGCATGGGGTAGGGCCGGCCGTATGCTCGCCTACAAGTGCCCGTCCCATGGCGGCGAGCTGGTCCAGGTTCCCGCCGCATACTCATCCCAAACATGTGCCTGTTGCGGCCATATCTCTAGGCAGAACCGTCGCCGCGCCCGCTTTCGCTGCGAGGCGTGCGGGCACACGGCATCGGCGGACACCAATGCGGCGCTGGTGATTCTTCAACGAGGACTTGCCGCCCGAAGCGGCACCGCCCCAGGGTATGGGGTGGCTGGACGTGGAGCCTTCGCCGCTGGGCGGGCAGTGAAGCGTCAACCCCCAACGAAGCAATCGGCCGATCGCTTCTGTAGGGTAGAGTCCCCAATCGCTCAGATTGGGGTCGGATACCAAGAGCCGATGGAGCGGAACTGA
PROTEIN sequence
Length: 463
MEAEGRRAVVRRRTYAARVYPTPAQAALLHRQGHTARALWNLLHSWYTCRDGGIASRPSIAEIDRQLRDARADPLPGWEWLAELPCQATQQVLKHYLRAWDHFQKGLARPPKVKKRSARLAIDVPQASKLRVTRLSRRWGEAAIPLIGRVRFRWTRPLPGISRGCPGRITGARLIKNPLGWHIAFRVEDAASAVPTNSCPPVGIDRGVAHTMALSDERYLDMPPLLSEKEQRRLRKLELQAARRRASRKPGAAMSNRERRTYDQIAALRARQARRREDWLHNKTTELSRNHSLIAIEDLRIKNMTRSPRGTVDRPGRQVRAKAGLNRSVHSMAWGRAGRMLAYKCPSHGGELVQVPAAYSSQTCACCGHISRQNRRRARFRCEACGHTASADTNAALVILQRGLAARSGTAPGYGVAGRGAFAAGRAVKRQPPTKQSADRFCRVESPIAQIGVGYQEPMERN*