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PLM1_30_b1_sep16_scaffold_3908_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2395..4134)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 586.0
  • Bit_score: 837
  • Evalue 1.10e-239
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1) similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 586.0
  • Bit_score: 834
  • Evalue 1.10e-239
Succinate dehydrogenase subunit A Tax=Frankia sp. (strain CcI3) RepID=Q2JF79_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 586.0
  • Bit_score: 834
  • Evalue 3.90e-239

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGACCCAGCAGCACACCTTCGACGTGGTGATCGTCGGAGCCGGGGGGGCCGGCCTGCGGGCGGCGCTGGAGAGCTCACGGCGAGGCCGGACGGCGGTGATCACCAAGCTGTACCCGACCCGCTCCCACACCGGGGCCGCCCAGGGCGGGATGTGCGCCGCCCTGGCCAATGTCGAAGAGGACAACTGGGAGTGGCACACCTTCGACACCATCAAGGGCGGCGACTACCTGGTCGACCAGGACGCGGCCGAGATCATGTGCCGGGAGGCGGTCGAGGCCGTCTACGACCTCGAGCACATGGGGATGCCGTTCAACCGGACCCCCGACGGCCTGATCGACCAGCGGCGCTTCGGCGGCCACACCCACCACCACGGTGCCGGGCCGGTGCGCCGCTCCTGCTTCGCCGCCGACCGCACCGGCCACATGATCCTCCAGACCCTGTTCCAGCAGAACGTCAAGCAGGGCACCATCTTCTTCGACGAGTTCTACGTGCTCGACCTGCTGCGGGCCCCGGACGACGGCCGGGCCGCCGGGCTGGTCGCCTACGAGCTGGCCACCGGCGAGCTGCACGTGTTCCGGGCCAAGTCGGTGGTCTTCTGCACCGGCGGCTACGGGAAGATGTTCAAGATCACCTCCAACGCCCACGCCCTCACCGGCGACGGCCCCGGTGTCTGCTACCGGCGCGGCGTGCCCATGGAGGACATGGAGTTCTTCCAGTTCCACCCGACCGGGCTGTACCGGCTGGGGGTGCTGCTCAGCGAGGCCGCCCGGGGCGAGGGCGGCATCCTGCGCAACGCCGACGGCGAGGCGTTCATGGAGCGCTACGCCCCCACCATCAAGGACCTGGCCCCCCGGGACATGGTCAGCCGGGCCATCTACACCGAGATCCGCGAGGGCCGCGGCGCCGGCCCCGACGGTGACTATGTCTACCTGGACGTCAGTCACCTCGACCCCAAGGTGATCGACGCCAAGCTGCCCGACATCACCGAGTTCGCCCGCACCTACCTGGGCGTCGAGCCCAAGAAGGAGGGCGTGCCGATCGTCCCGACGGCCCACTACGCCATGGGCGGCATCCCCACCACCGTCGACGCCCAGGTGGTCGGCGACGCGGCCAACACGGCCATCCCGGGGCTGTTCGCGGCCGGCGAGTGCGCCTGTGTGTCGGTGCACGGGGCCAACCGGCTCGGCACCAACTCGCTGCTGGACATCGTCGTGTTCGGCAAGCGGGCCGGGGTCAACGCCGCCGAGCACGCGGCCGGCGTCGGCCACGTCGAACTGCCCGAGGACCCGGCCGGCGCCGTCACCCGGATGCTGGATGACCTGGCCGGCCACCCCGAGGGCGAGCGGGCCGCCGCCATCCGAGGTGACCTCCAGGTCAACATGGACGACAAGGCCGGGGTGTACCGCACCGAGACCCTCCTCAAGGAGATGGAGGTCGAGCTGGGCTCGCTGCATGAGCGCTACGCCCGGGTCTGGGTCCAGGACACCTCCCGGCGCTACAACACCGACCTGCTGGAGGCGGTCGAGCTGGGGTTCCTGCTCGACCTGGCCGAGGCCCTGGTCGTCTCGGCCCGGGCCCGCACCGAGAGCCGCGGCGGCCACTTCCGCGAGGACCACCCGGTCCGCGACGACAAGAACTGGCTCAAGCACAGCCTGGCCTCGCGCACCGCCAGCGGGGTCAAGCTCGGCTACAAGCCGGTCACCATCACTCGGTATCAGCCTATGGAGAGGAAGTACTGA
PROTEIN sequence
Length: 580
MTQQHTFDVVIVGAGGAGLRAALESSRRGRTAVITKLYPTRSHTGAAQGGMCAALANVEEDNWEWHTFDTIKGGDYLVDQDAAEIMCREAVEAVYDLEHMGMPFNRTPDGLIDQRRFGGHTHHHGAGPVRRSCFAADRTGHMILQTLFQQNVKQGTIFFDEFYVLDLLRAPDDGRAAGLVAYELATGELHVFRAKSVVFCTGGYGKMFKITSNAHALTGDGPGVCYRRGVPMEDMEFFQFHPTGLYRLGVLLSEAARGEGGILRNADGEAFMERYAPTIKDLAPRDMVSRAIYTEIREGRGAGPDGDYVYLDVSHLDPKVIDAKLPDITEFARTYLGVEPKKEGVPIVPTAHYAMGGIPTTVDAQVVGDAANTAIPGLFAAGECACVSVHGANRLGTNSLLDIVVFGKRAGVNAAEHAAGVGHVELPEDPAGAVTRMLDDLAGHPEGERAAAIRGDLQVNMDDKAGVYRTETLLKEMEVELGSLHERYARVWVQDTSRRYNTDLLEAVELGFLLDLAEALVVSARARTESRGGHFREDHPVRDDKNWLKHSLASRTASGVKLGYKPVTITRYQPMERKY*