ggKbase home page

PLM1_30_b1_sep16_scaffold_4639_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1332..1694

Top 3 Functional Annotations

Value Algorithm Source
Phage shock protein C, PspC Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4E0_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 132
  • Evalue 2.00e-28
phage shock protein C, PspC similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 132
  • Evalue 5.60e-29
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 121.0
  • Bit_score: 139
  • Evalue 1.70e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 363
GTGCGCCGCAGCCGCAGCGAGCGGGTGATCGCCGGGGTGTGCGGCGGGATCGGCCGCTACCTGGGGGTCGACCCGATGCTGCTGCGGATCTCCTTCATCGTCCTGGCCCTGGCCAACGGGCTCGGGGTGATCGCCTACGTGGTCGCCTGGGTGGCCATCCCCGAGGAGCGGCCGGGCCAGCCGCTGGCCGCGGCGCCCGAGCCTCGGCGGGAGACGGGCCGGCTGGTGCTGGGCGGCTCCCTGGTCGTGCTCGGCCTGGTCCTGCTGGTGAACCGGCTCGCCCCCAACCTGGACGAGCTGTTCTGGCCGGTGGCGTTGGTCGCCGTCGGGGTCGCGGTCATGCTCGTGGGGCTGCGCCGATGA
PROTEIN sequence
Length: 121
VRRSRSERVIAGVCGGIGRYLGVDPMLLRISFIVLALANGLGVIAYVVAWVAIPEERPGQPLAAAPEPRRETGRLVLGGSLVVLGLVLLVNRLAPNLDELFWPVALVAVGVAVMLVGLRR*