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PLM1_30_b1_sep16_scaffold_5921_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2330..3358)

Top 3 Functional Annotations

Value Algorithm Source
Autoinducer 2-binding protein lsrB Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZE9_ACTS5 similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 344.0
  • Bit_score: 464
  • Evalue 4.80e-128
Predicted L-rhamnose ABC transporter, substrate-binding component {ECO:0000313|EMBL:CEL16816.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 336.0
  • Bit_score: 466
  • Evalue 1.80e-128
Autoinducer 2-binding protein lsrB similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 344.0
  • Bit_score: 464
  • Evalue 1.30e-128

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGAGGTCGAAGGTAGGCGTCAGATCAGCCCTGGTGCTCATGGTGTGTGCAGCACTGGCGCTGGTCGGCTGCAGCAAGAAGGACGAGGGGGGCTCGGCCTCCGGTGGCGGCGAATCCAAGACCGTCAAGGTGGCCTTCGTCCCCAAGCTCCAGGGTGTGCCGTACTTCGAGGCGATGAACACCGGTGGGAAGAAGGCGGCCCAGGACCTGGGGCTGGAGTGGATCTACAAGGGCCCGACGACGGCCGACCCGGGCGCCCAGACCGACATCGTCAAGTCGCTCATCCAGCAGAAGGTCGACGTGCTGGTGGTCGCCCCCAACGACCCCGACTCGATGGCCCCGATCCTGGCCGACGCCAAGTCCAAGGGCATCAGGGTCATGACCTCCGACACCGACGCGCCCAACTCGGTGCGTGAGCTGTTCGTCAACCAGGCGACCGCCGAGGGCATCGGGCAGGGCCTGACCGACGCGCTGCTGGAGAAGGCCGGGTCCGACGCCCAGTACGCGATCGTGTCGTGTGGCCAGACCGCGGCCAACCTGAACTCCTGGATCGAGGTCCAGAAGTCCTACACCGCCTCCAAGTACCCCAACGCCAAGATCGTCGACATCGTCTACGCCGGTGAGGACGAGGCCAAGGCCGTCGCCATGGCCAAGGACCTGATGAACGCCAACCCCGGCATCAAGGGCCTGGTCGGCGAGTGCACCTCCTCGGCCCCTGGCGTGGCCAAGGCGGTCAAGGAGGCCGGCAAGATCGGCAAGGTGTTCACCGTCGGGCTGGGCACGCCCCAGGCGATGAAGCCGTACCTGGACGACGGCTCTTCCACCGCGGCCATCCTGTGGGACGTCGAGCAGCTGGGCTACCTCACCGCCTGGTCGGCCAAGCAGCTGTACGACAACAAGGAGCTGGCGGCCAAGAACCAGGTCAACGACAAGCTGACCGCGGTGGAGTACTTCCCGGACAACAAGATGGTCCTGCTCGGCCCGCCGCTGCGGATCACCAAGGACATCGTCAACCAGTTCAACTACTGA
PROTEIN sequence
Length: 343
MRSKVGVRSALVLMVCAALALVGCSKKDEGGSASGGGESKTVKVAFVPKLQGVPYFEAMNTGGKKAAQDLGLEWIYKGPTTADPGAQTDIVKSLIQQKVDVLVVAPNDPDSMAPILADAKSKGIRVMTSDTDAPNSVRELFVNQATAEGIGQGLTDALLEKAGSDAQYAIVSCGQTAANLNSWIEVQKSYTASKYPNAKIVDIVYAGEDEAKAVAMAKDLMNANPGIKGLVGECTSSAPGVAKAVKEAGKIGKVFTVGLGTPQAMKPYLDDGSSTAAILWDVEQLGYLTAWSAKQLYDNKELAAKNQVNDKLTAVEYFPDNKMVLLGPPLRITKDIVNQFNY*