ggKbase home page

PLM1_30_b1_sep16_scaffold_6793_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1211..2560

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003680B7D similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 459.0
  • Bit_score: 429
  • Evalue 2.20e-117
Transposase {ECO:0000313|EMBL:EYT65079.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia sp. UCD-THP.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 452.0
  • Bit_score: 402
  • Evalue 5.30e-109
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 471.0
  • Bit_score: 398
  • Evalue 2.00e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dietzia sp. UCD-THP → Dietzia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
TTGCGGGTGCAGGCTACCAACTGTGTGTCCGGCTTCGAAGTCACCACCGATGGTACCGGGGTCGTCAGCCATGCCGGGGCGGCGTTGCTGGGTGAGCTGGCCGACCGGGTCGGACTGACCAAGGCGCTGGGCTGGCGAGCCGCCGCCGCCCGCCGCCATCGGGATGCGGCCGTGTTGCGCGATCTGGCGGTGATGCTGGCCGATGGTGGGGACTGCCTGAGCGACCTGGCGGTGCTGCGTGACCAGCCGGAGCTGTTCGGCCCGGTGGCCTCGACCCCGACCGCCTGGCGGGTGGTCGAACGAGTCGCCACCGACCCTGACGGGTTGGCCAGGCTGCGCGCCGCCAGGGCCCATGGCCGCGCCCGCGCCTGGGCCGCCGGCGCCCACCCCGACCCCGAGCTGCTGATCGTCGACGCGGATGCGACCCTGGTGCTGGCCCACAGCGATGCCAAGCAGGGCGCCGAGGGCACCGACAAGGGATCGTTCGGGTTTCATCCGCTGCTGGCGTATCTGGACCGCGGCCAGGCTCCCGGCGAGCCGCTGGCCGGCCTGCTGCGACCAGGCAACGCCCCCGCCGGCGGCGCCGACGATCTGATCGAGCTGGTCGACCTCGCCCTCGCCCAGCTCCCAGCAGCCGCCCGGGACCAGCCGGTCCTGGTCCGCAGCGACAGCGCCGGGGCCAGCACCCGGCTCGCCTGGCACCTCCGCGACGATCAGGTCGGGTTCTCGCTGGGGATGCCGATCGACGCCCATCTCCGCGAGGCGATCCTCACCCAACCCGAGCACGTCTGGACCCCAGCGATCGACGCCGCCGGCCAGCCCCGTGAGGGTGCGGAGGTGTGCGAGCTGACCGGCTGGATCGACCTGCACACCTGGCCGGAAGGTACCCGCGCGATCTGCCGCCGCGAGGACGCCCACCCCGGCGCCCAGCTGCGCTTCAGCGACCACGACGGGCACCGCTTCCAGGTGTTCCTCACCGACCAGCCCGACGGCGACCTCGCCGCCCTGGAGCTACGGCACCGCCAGCGCGCCCGGATCGAGGACCGCATCCGCGCCGCCAAAGCCACCGGCCTGCGCAACCTCCCCTTTGACCGCTGGCGCCGCAACACCGTCTGGCTGGAGCTGGTCCTGGCCGCCCAAGACCTCACCGTCTGGACCCAGGCGCTGCTGCTGGACGGCGACCTGGCCGTGGCGGAACCCAAGACGTTGCGCTACCGGCTGTGGCATGTCGCCGCCCGGATCGTCCGCCACGCCCGCCGCCGGATCCTTCGCCGGCAACGCTCTTGGCCCTGGGCGGTCACCCTCGCCAGGGCGTTCGCCCGGCTGCGTGCCCTGCCGGCGCGCTGCTGA
PROTEIN sequence
Length: 450
LRVQATNCVSGFEVTTDGTGVVSHAGAALLGELADRVGLTKALGWRAAAARRHRDAAVLRDLAVMLADGGDCLSDLAVLRDQPELFGPVASTPTAWRVVERVATDPDGLARLRAARAHGRARAWAAGAHPDPELLIVDADATLVLAHSDAKQGAEGTDKGSFGFHPLLAYLDRGQAPGEPLAGLLRPGNAPAGGADDLIELVDLALAQLPAAARDQPVLVRSDSAGASTRLAWHLRDDQVGFSLGMPIDAHLREAILTQPEHVWTPAIDAAGQPREGAEVCELTGWIDLHTWPEGTRAICRREDAHPGAQLRFSDHDGHRFQVFLTDQPDGDLAALELRHRQRARIEDRIRAAKATGLRNLPFDRWRRNTVWLELVLAAQDLTVWTQALLLDGDLAVAEPKTLRYRLWHVAARIVRHARRRILRRQRSWPWAVTLARAFARLRALPARC*