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PLM1_30_b1_sep16_scaffold_8020_7

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4450..5328)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 291.0
  • Bit_score: 289
  • Evalue 6.60e-76
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 291.0
  • Bit_score: 289
  • Evalue 3.30e-75
DNA ligase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B529_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 291.0
  • Bit_score: 289
  • Evalue 2.30e-75

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATCCCCGAGGTGGTCGGCCCGGTCCTGACCAAGCGGCCCAAGCGGCTGCGGCGCTGGAGGTTCCCGGCCAAGTGCCCCGAGTGCGGCACCCCCCTGGTCCGCCCGGAGGGGGCGTCGGCCACCCGCTGCCCCAACACCACCGGCTGCCCGGCCCAGCGCTGGGGCACTCTGGTCCACTTCGCCGGCCGCGGGGCCATGGACATCGAGCACCTGGGCGAGAAGACCATCGCCGCCCTGATCGAGGCCGGCAAGCTCCGCGACGCGGCCGACATCTACCGGATCACCGCCGAGGACCTCACCGAGCTGGGTGGCTTCAAGGACCGCTCCATCGCCAACCTCCTGGCCGCGATCGAGGCCTCCAAGCAGCGCCCGCTGGACCGGCTGCTGGTCGGCCTGTCCATCCGCCACGTCGGCGGCACCGTGGCCAGCCTGCTCGCCAACCGGCTCAAGTCCCTTGAGGCGATCGCCGCCGCCTCCGAGGAGGAGCTGGCCGACGTCGGCGGGGTCGGTCCCACCATCGCCGCCAGCGTCGTCGCCTGGTTCGCCGACGCCGACAACCAGGACCTGGTCCGCCGCCTGGTCGAGGTCGGCGTCAACACCAAGGCCGACGGCGACAACGGGATCGAGCTGCCCCAGACCCTGGCCGGCATGTCGTTCGTCCTCACCGGCAGCCTCGACGGCTTCACCCGCGACCAGGCCGCCCGCGCCATTGAGGACCGCGGCGGCCGGGTCGCCTCCAGCGTCTCCAAGAAGACCGCCTACGTCGTCGTCGGCGCCGACCCAGGCTCCAAGGCCGCCCGCGCCACCGAGCTCGGTGTCCCCACCCTCGACGAGCCGGCCTTCGCCGCCCTCCTCGAACGGGAGGTGGGCGATGGGTGA
PROTEIN sequence
Length: 293
IPEVVGPVLTKRPKRLRRWRFPAKCPECGTPLVRPEGASATRCPNTTGCPAQRWGTLVHFAGRGAMDIEHLGEKTIAALIEAGKLRDAADIYRITAEDLTELGGFKDRSIANLLAAIEASKQRPLDRLLVGLSIRHVGGTVASLLANRLKSLEAIAAASEEELADVGGVGPTIAASVVAWFADADNQDLVRRLVEVGVNTKADGDNGIELPQTLAGMSFVLTGSLDGFTRDQAARAIEDRGGRVASSVSKKTAYVVVGADPGSKAARATELGVPTLDEPAFAALLEREVGDG*