ggKbase home page

PLM1_30_b1_sep16_scaffold_8334_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(516..1907)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase (reverse transcriptase) (EC:2.7.7.49) similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 449.0
  • Bit_score: 610
  • Evalue 2.10e-172
RNA-directed DNA polymerase Tax=Salinispora pacifica RepID=UPI000361440C similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 451.0
  • Bit_score: 631
  • Evalue 4.00e-178
DNA polymerase {ECO:0000313|EMBL:KDS83890.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 464.0
  • Bit_score: 616
  • Evalue 1.90e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces fradiae → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
TTGTGCGTGGGCTGCGGGAGGGGTCGGGTGAGTGCCGTTTCGGCTAGGTCCACCCTTGCCACTGTCGGGAACGACAGGACTCGAGCCTTGCAGCACGCGCTGTACCGGGCGGCCAAGGCCGACCCGACCAGACGGTTCCATGCGCTGTTCGACAAGGTCTGCCGCAGGGACGTGTTGGACAGGGCGTGGGAGCAGGTGCGCCGCAACCGCGGCGCCGCTGGCATCGACCGCGTCACCTTGGCAACGGTTGAGGAGTACGGCGTGACCCGGCTCCTTGACGAGCTGGTCACGGAGTTGAGGGAACGGCGGTATCGGCCGTTGCCGGCCCGGCGGGTGTTCATCCCCAAGCCGGGGACCGCCGAGCAGCGTCCGCTGTCGATCCCTGCGGTGCGTGACCGCATCGTGCAAGCGGCGGTGAGGATCGTGCTCGAGCCGATCTTCGAGGCCGACATGCTGGACTGCTCCTTCGGGTTCCGCCCGAGGCGGTCGGCGCACGATGCCCTGCAGGTGCTCATCGATGAGTCCTGGCGGGGTCGGCGCTGGGTGGTGGAGACGGACATCGCCAACTGCTTTGAGGCGATTCCGCACGCCGGGTTGATGCAGGCGATCGAGGAGCGCGTGTGCGACCGAGCCATCCTGGACCTGGTGCGCGGCATGCTGCGCGCCGGGGTGATGGAGGCCGGGTCGCTGCGGCAAGGCGACACCGGGACGCCACAGGGCGGGGTGATCTCCCCGCTGCTATGCAACGTCTACCTGCACCGGCTGGACCGGGCATGGCAGGCGCGCGAGCATGGCGTGCTGGTGCGCTACGCCGACGACGCGCTGGTGATGTGCAAAAGCAGGAGACAGGCCGAGGCCGCGCTGGCGCGGCTGACGGTGCTGCTGGCCGAGCTGGGGCTGAAACCCAAAGCGGCTAAGACCCGCATCGTGCACCTGGCCGAAGGCGAAGAAGGCTTCGATTTCCTGGGCTTTCACCATCGGCTGGTGCGCGGGCGGACCCCGAAATCGGCACACCTGACCTTCCTCGCTCGCTGGCCCGCACGCAAGGCCGTCCAACGAGCCCGCGACCGGATCCGGGAGATCACCGGCCGGCGGTGGCTCTGGATGCCGGTCGAGGACATCGTCAGGGACCTCAACCTGTTCCTGCGCGGCTGGGCGGGATACTTCCGCTACGGCAACTCCGCCCGTGTCCTTGGCCAGATCAGGAACTACGCCCTCCAGCGGCTCGCGATCTGGCTGTCCAAGCAGGGCAACCAGCGACGAGCCTGGCGATGGGGCCTCAAACAACTGCTCCTGTCGCCCAACCGGATGGGCCTGATCAGCCTTGATGGAACCGTCGTTGCGCCCAGACCCTTCCGGGACTGGCGCGGCAAGGCCGAACACCGCCGGTGA
PROTEIN sequence
Length: 464
LCVGCGRGRVSAVSARSTLATVGNDRTRALQHALYRAAKADPTRRFHALFDKVCRRDVLDRAWEQVRRNRGAAGIDRVTLATVEEYGVTRLLDELVTELRERRYRPLPARRVFIPKPGTAEQRPLSIPAVRDRIVQAAVRIVLEPIFEADMLDCSFGFRPRRSAHDALQVLIDESWRGRRWVVETDIANCFEAIPHAGLMQAIEERVCDRAILDLVRGMLRAGVMEAGSLRQGDTGTPQGGVISPLLCNVYLHRLDRAWQAREHGVLVRYADDALVMCKSRRQAEAALARLTVLLAELGLKPKAAKTRIVHLAEGEEGFDFLGFHHRLVRGRTPKSAHLTFLARWPARKAVQRARDRIREITGRRWLWMPVEDIVRDLNLFLRGWAGYFRYGNSARVLGQIRNYALQRLAIWLSKQGNQRRAWRWGLKQLLLSPNRMGLISLDGTVVAPRPFRDWRGKAEHRR*