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PLM1_30_b1_sep16_scaffold_11402_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1557..3329)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 600.0
  • Bit_score: 852
  • Evalue 2.60e-244
Elongation factor 4 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B3X0_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 600.0
  • Bit_score: 852
  • Evalue 1.80e-244
GTP-binding protein lepA similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 600.0
  • Bit_score: 852
  • Evalue 5.20e-245

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1773
ATGCCGACTGACCTTTCACGCCTGCGCAACTTCTGCATCATTGCCCACATCGACCATGGGAAGTCCACCCTGGCCGACCGACTGCTCGATCTCACCCACGCCGTGAGTGAGCGCAACATGCGCGCCCAGTACCTCGACAAGATGGACCTGGAGCGCGAGCGAGGCATCACCATCAAGGCCCAGGCGGTGCGGCTGGGCTATGCCGCCGCCGACGGCCGCGAGTACGTCCTCAACCTGATCGACACCCCCGGGCACGTCGACTTCACCTATGAGGTGTCGCGGGCCCTGGCCGCCTGTGAGGGGGCCGTGCTGCTGGTCGACGCCGCCCAGGGGATCGAGGCCCAGACGCTGGCCAACCTCTACCTGGCCGTCGAGGCCGACCTGACGATCATCCCGGTGATCAACAAGATCGACCTGCCGGCCGCCCAGCCGGACCGGGTCGCCCGTGAGATCGAGCAGGTCCTGGGCACGCCGGCGTCCGAGATGCTGCGGGTCTCGGCCAAGACCGGCGAGGGCGTGCCCGACCTGCTGGAGGCCATCGTCCGGCGGGTGCCGCCGCCCACCGGCGACCCCGAGGCCCCGGCCCGGGCGCTGGTGTTCGACTCGCTCTACGACTCCTACCGGGGCGTGATCGCCTACGTGCGGATGGTCGACGGTCGCCTGTCCAAGAACGACCGGGTGCGGATGATGGCCGCCGGGCACACCTCGGAGGCCGAGGAGGTCGGGGTGTTCGCCCCCGAGGCCGTCCCCACCGCCGAGCTCCAGGCCGGCGAGGTCGGCTACCTCATCCCGGGCGTCAAGGACGTGCGCCAGGTCCGGGTGGGGGACACCGTCACCACCGCCAGCCGGCCGGCGGCCGAGCCGCTGGGTGGCTACCGGGAGCCGCGGCACGACTTCCCCGACCTGCGCGACGCCCTGGACCGGCTGCGGCTCAACGACGCCGCCCTGGTCTACGAGCCCGAGTCCTCGACCGCGCTCGGGTTCGGGTTCCGCTGCGGCTTCCTCGGGCTGCTCCACATGGACATCGTGCGCGAGCGGCTGGAGCGGGAGTTCGACCTGGCCCTGATCACCACCGCCCCCAACGTCGCCTACCGGGTCACCTTGGAGACGGGGGAGACGATCATGGTCTCCAACCCCAGCGAGCTGCCGCCCGCGGGGTCGGTCCAGCGGATCGAGGAGCCGTACGTCTCCGCGATGGTGCTGTGCCCGGCCGACTACATCGGCCCGGTGATGGAGCTGTGCCAGGGGCGGCGGGGCGAGCTGGTGACCATGGAGTACCTGTCCGAGGAGCGGGTCGAGCTGCGCTACCAGCTCCCCCTCGGCGAGATCATCTTCGACTTCTTCGACCAGCTGAAGTCGCGGACCCGCGGGTACGCCTCGCTCGACTACGAGCCCAGCGGGTACCGGGAGGCCGACCTGGTCAAGGTCGACGTGCTGCTCCAGGGCGAGCCGGTCGACGCCTTCTCGGCCATCGTCCACAAGGACAAGGCGTACGCCTACGGCCGGGCGATGACGGCCAAGCTCAAGCGGCTGATCCCGCGCCAGCTCTACGAGGTCCCGATCCAGGCGACCATCGGGGCCAAGGTGATCGCCCGCGAGACCATCACCGCCCGGCGCAAGGACGTGCTCGCCAAATGCTACGGCGGCGACGTCACCCGCAAGCGCAAGCTGCTGGAGCGCCAGAAGGAAGGCAAGCGGCGGATGAAGCAGATCGGCCGGGTCGAGGTCCCCCAGGAGGCGTTCGTGGCCGCCCTGCGGACCGACGAGAGCTGA
PROTEIN sequence
Length: 591
MPTDLSRLRNFCIIAHIDHGKSTLADRLLDLTHAVSERNMRAQYLDKMDLERERGITIKAQAVRLGYAAADGREYVLNLIDTPGHVDFTYEVSRALAACEGAVLLVDAAQGIEAQTLANLYLAVEADLTIIPVINKIDLPAAQPDRVAREIEQVLGTPASEMLRVSAKTGEGVPDLLEAIVRRVPPPTGDPEAPARALVFDSLYDSYRGVIAYVRMVDGRLSKNDRVRMMAAGHTSEAEEVGVFAPEAVPTAELQAGEVGYLIPGVKDVRQVRVGDTVTTASRPAAEPLGGYREPRHDFPDLRDALDRLRLNDAALVYEPESSTALGFGFRCGFLGLLHMDIVRERLEREFDLALITTAPNVAYRVTLETGETIMVSNPSELPPAGSVQRIEEPYVSAMVLCPADYIGPVMELCQGRRGELVTMEYLSEERVELRYQLPLGEIIFDFFDQLKSRTRGYASLDYEPSGYREADLVKVDVLLQGEPVDAFSAIVHKDKAYAYGRAMTAKLKRLIPRQLYEVPIQATIGAKVIARETITARRKDVLAKCYGGDVTRKRKLLERQKEGKRRMKQIGRVEVPQEAFVAALRTDES*