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PLM1_30_b1_sep16_scaffold_14057_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 708..1640

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 311.0
  • Bit_score: 406
  • Evalue 2.00e-110
DNA-directed RNA polymerase subunit alpha Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y545_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 307.0
  • Bit_score: 405
  • Evalue 3.10e-110
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 307.0
  • Bit_score: 405
  • Evalue 8.80e-111

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Taxonomy

Saccharopolyspora rectivirgula → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGGAGATCTCGCGCCCACGCATCGAGTCCAACCCACTGTCGGACACCCGCTCGCGCTTCGTCATCGAGCCGCTGGAGCCCGGCTTCGGCTACACGCTCGGCAACTCGCTGCGCCGCACCCTGCTGTCGTCCATCCCGGGCGCCGCCGTCACGTCGATCAAGATCGACGGCGTCCTGCACGAGTTCTCGTCCATCCAGGGCGTGAAGGAGGACGTCACCGACGTCATCCTCAACGTCAAGGAGCTGCGCCTGCGCTCGGAGACCAACGAGCCGGCGACCATGTTCCTGCGCTCCACCGGCCCCGGTGACGTGACCGCGGCCGACATCGTGCCCCCGGCCGACATCGACGTCATCAACCCCGAGCTGCACCTGGCCACCCTGAACACCAAGGCCAAGCTGGAGATGGAGCTGCGGGTCGAGAAGGGCCGCGGCTACCGGCCGGCCGAGCGCAACAAGTCGGCCTCCGACGAGATCGGCCGCATCCCGGTCGACTCGATCTTCTCGCCGGTGCGCCGGGTCAGCTACACCGTCGAGGCCACCCGCTCGGGCGAGATGACCAACTACGACCGGCTGATCCTCGACGTCGAGACCGACGGCTCGCTGACCCCTGAGGACGCGCTGGCCTCGGCCGGCGGGACCCTGCGGGAGCTGGTCAGCCTGTTCGCCGACCTGACCGGCGGCGGCGAGGGCCTCTCGCTCGGCCCGGCCGAGCAGACCGGCCCGCTCGGGGCCAACCTGGACACGCCGATCGAGGAGCTCGACCTGTCGGTCCGCTCCTACAACTGCCTGAAGCGCGAGGGCATCACCACGGTCGGCGAGCTGGTCACCAAGTCCGAGGCCGACCTGCTCGACATCCGCAACTTCGGCGCCAAGTCGATCGACGAGGTCCGCGAGAAGCTCCAGGAGCTCGGCCTTTCGCTGAGGGAGGAATAA
PROTEIN sequence
Length: 311
MEISRPRIESNPLSDTRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVLHEFSSIQGVKEDVTDVILNVKELRLRSETNEPATMFLRSTGPGDVTAADIVPPADIDVINPELHLATLNTKAKLEMELRVEKGRGYRPAERNKSASDEIGRIPVDSIFSPVRRVSYTVEATRSGEMTNYDRLILDVETDGSLTPEDALASAGGTLRELVSLFADLTGGGEGLSLGPAEQTGPLGANLDTPIEELDLSVRSYNCLKREGITTVGELVTKSEADLLDIRNFGAKSIDEVREKLQELGLSLREE*