ggKbase home page

PLM1_30_b1_sep16_scaffold_16143_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1065..1277)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein Tax=Actinopolymorpha alba RepID=UPI000365D564 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 64.0
  • Bit_score: 100
  • Evalue 3.70e-19
DNA-binding protein {ECO:0000313|EMBL:EWT00941.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 60.0
  • Bit_score: 102
  • Evalue 2.30e-19
excisionase family DNA binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 57.0
  • Bit_score: 99
  • Evalue 3.00e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGTCCGCCAGTCGTACCGTCCAGTCTGCGCCTGCTCCTGAGGCGCTGCTCACCCCGGCGGAGGTCGCCGCGCTGTTCCGTGTCGACCCCAAGACCGTGACCCGCTGGGCCAAAGCAGGCAAGCTCTCGAGCATCCGCACCCTCGGCGGACACCGTCGCTACCGCGAGACGGAAGTCCGCCAGCTGCTCCGCGGCGTCGAAGCCGGCGGCTAG
PROTEIN sequence
Length: 71
MSASRTVQSAPAPEALLTPAEVAALFRVDPKTVTRWAKAGKLSSIRTLGGHRRYRETEVRQLLRGVEAGG*