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PLM1_30_b1_sep16_scaffold_17871_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1331..1972)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C biogenesis protein Tax=Frankia sp. Iso899 RepID=UPI0003B461BD similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 195.0
  • Bit_score: 240
  • Evalue 1.60e-60
Thioredoxin {ECO:0000313|EMBL:ESX64312.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 176.0
  • Bit_score: 235
  • Evalue 5.40e-59
ahpC/TSA family protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 195.0
  • Bit_score: 206
  • Evalue 4.10e-51

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGCCTTCGACAACCGGTACTGGCCGGCCCTCTACTTCGTCGACGCCCAAGGGCGGATCCGGCACCATCGCTTCGGCGAGGGCGACTACGAGCAGTCAGAGGCGATCATTCGAGGCCGGGATCGGCCGCATCGGGCACGAGCTGGTTTTGGTCGATGCCGGTGGGGTGGAGGCCGCCGCCGACTGGGACAGCCTGTGGTCGCCGGAGAACTACCTTGGCTATGGGCGTACTGAGAACTTCGCCTCCTCCAATGGCGCGGTCCTGGACACCCCGCACGGCTATGCCGCCCCCGCGCGGTTGGCCCTCAACCAGTGGGCCCTGGCCGGCAACTGGACGGTGGGGCGGCAGGCGATCGTGCTCAACCAGGCCGGGGGGCGGATCGCCTACCGCTTCCACGCCCGGGACCTGCACATGGTCATGGCTCCGCTGGCACCGGGGACCTCGGTGCGGTTCCGGGTGGAGCTCGATGGGCAGCCGCCGGGCGCCGCTCACGGAACTGACCTGGACGACCAGGGCAACGGCACCCTCACCGACCCACGGCTGTACCAGCTCGTCCGCCAGCCCGGCCCGGTCAGCGAGCGCACCTTCGAGATCACCTTCATGGATCCTGGCGTCCAGGCCTACGTCTTCACCTTCGGCTAA
PROTEIN sequence
Length: 214
MPSTTGTGRPSTSSTPKGGSGTIASARATTSSQRRSFEAGIGRIGHELVLVDAGGVEAAADWDSLWSPENYLGYGRTENFASSNGAVLDTPHGYAAPARLALNQWALAGNWTVGRQAIVLNQAGGRIAYRFHARDLHMVMAPLAPGTSVRFRVELDGQPPGAAHGTDLDDQGNGTLTDPRLYQLVRQPGPVSERTFEITFMDPGVQAYVFTFG*