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PLM1_30_b1_sep16_scaffold_26098_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 841..1623

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family Tax=Frankia sp. QA3 RepID=I8QQD0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 272.0
  • Bit_score: 327
  • Evalue 9.00e-87
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:KJE25258.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 272.0
  • Bit_score: 327
  • Evalue 9.70e-87
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 272.0
  • Bit_score: 322
  • Evalue 6.30e-86

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGCTGGGCTCGCTCAGCGAGGCCGACGACGCCGTCCAGGAAGCCTGGCTGCGCCTCCAGCGCACCGACCCCGACAGCGTCGACAACCTGGGCGGCTGGCTCACCACCGTGGTCGCCCGGGTCTGCCTGGACATGCTGCGGGCGCGCGGCTCGCGGCGTGAGGAGCCGCTGGAGGGCGGCCTGCCCGACCGGGTGGTGGACGCCCGCGACCGGGACGCGGTCGGGCTGGCGCTGCTGGTGGTCCTGGAGGAGCTGGCACCGGCCGAGCGGCTGGCGTTGGTGTTACATGACACCTTCGCGGTGCCGTTTGGGGAGATCGCCGCCATCCTGGGGCGTTCCCCGGCCGCCGCCCGCCAGCTGGCCAGCCGCGCCCGCCGCCGGGTCCGGGCCTCGACCGCGCTGCCCGATGCCGATCTCGCCCGCCAGCGCAGGGTGGTCGATGCCTTCCTTGCGGCCGCCCGCAACGGTGACCTGGATGCGCTCGTTGCGGTGCTGGACCCAGAGGTGGTCGTCCGCGCCGACTGGGGCAAGGTCCCCGCAGGCGCCTCCAGGACCCTCCAGGGGCCGCGGGCCGTGGCCAAGCAGGCGCTGGCCTTCTCACAACGCGCCCGATCCGTGCGGCCCGCGCTGGTGAACGGCACCGCCGGCGTGGTCGCGGACACGGGCGGGCGACTGCTTGCGGTGATGGGGTTCACGGTCAGACGCGGGAAGATCCTGGAGATCGACATCCTCGCCGACCCCGCCCGCCTGCGCCGGCTCGACCTACCAGTCCCACACACCTGA
PROTEIN sequence
Length: 261
MLGSLSEADDAVQEAWLRLQRTDPDSVDNLGGWLTTVVARVCLDMLRARGSRREEPLEGGLPDRVVDARDRDAVGLALLVVLEELAPAERLALVLHDTFAVPFGEIAAILGRSPAAARQLASRARRRVRASTALPDADLARQRRVVDAFLAAARNGDLDALVAVLDPEVVVRADWGKVPAGASRTLQGPRAVAKQALAFSQRARSVRPALVNGTAGVVADTGGRLLAVMGFTVRRGKILEIDILADPARLRRLDLPVPHT*