ggKbase home page

PLM1_5_b1_sep16_scaffold_3631_4

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(2170..3066)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family bin=GWC2_Nitrospirae_57_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 295.0
  • Bit_score: 216
  • Evalue 2.60e-53
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 295.0
  • Bit_score: 208
  • Evalue 1.50e-51
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 297.0
  • Bit_score: 349
  • Evalue 2.70e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCTTATGGATACCCGTCAGCTCGCCGCCTTTTGCACGGTCGTCGAGAAGAGCAGCTTCTCACAGGCCGCGGAGAAGCTCGGCGTCACGCAGCCCGCGGTCAGCCTCCAGGTTCGCGCCCTCGAGGAGCGCCTCGGGCAGACGCTACTCGACCGCTCCGGCCGCCGGGTCGAGCCGACGGAGGCGGGCCTCCGCCTGTACCGCAGCGCGCAAAGGATGCTGGCCCTCGAGGAGCAGCTCTACGACGAGGTCGCCGCCGAGAGCGGCGAGCTCCAGGGCACGCTCGCGATCGGCGCTTCCACCGGCCCCGGCGCACACCTTGTCCCACTTCTCCTCTGCGAGTTCCAGCGCGACCACCCGGAGCTCCACGTGGCCCTCTTCATCTGGGACACGCAAACGGTGAGCGAGAAGGTGGCGCAGCGGGAGCTCGAGCTCGGCGTCGTCGGTGCGCTTCGCCGGAACCGGTCGCTCGAGTTCGAGCCTCTGGTCCGGGATGAGATCGTCCTCGCCGTTCCTCCCGGCCATCAGGCGGCCGGAGGCTCGGTGACGGTGGACGACCTGCGGGAGGAGACGGTGATTTCCATGCAGGAGGGCGCGGGGGTGCGGCAGGTCGTCGACGAGGAGCTCCGCCGCGCCGGCCTACGGGTGCGCGACCTCGGGCCGAAGCTGGAGCTCGGCCTGCAGGAGTCGGTGAAGAGCGCCGTCTCCGCCGGCTTCGGCGTCACGTTCATCTCGCGCACGGCGATCGAGGGCGAGCTCGCCGCGGGCACGCTTGCCATGGCCCGCGTCCCCGGCCTCGAGCCCGCGAGGCAGATCTACGTCGTGCGGGCGAAGGGACGGCCGCCGACCCGCGCCGCCGACGCCTTCCTCGAGTTCGCGCGCGAAAAAACGTCGTGA
PROTEIN sequence
Length: 299
MLMDTRQLAAFCTVVEKSSFSQAAEKLGVTQPAVSLQVRALEERLGQTLLDRSGRRVEPTEAGLRLYRSAQRMLALEEQLYDEVAAESGELQGTLAIGASTGPGAHLVPLLLCEFQRDHPELHVALFIWDTQTVSEKVAQRELELGVVGALRRNRSLEFEPLVRDEIVLAVPPGHQAAGGSVTVDDLREETVISMQEGAGVRQVVDEELRRAGLRVRDLGPKLELGLQESVKSAVSAGFGVTFISRTAIEGELAAGTLAMARVPGLEPARQIYVVRAKGRPPTRAADAFLEFAREKTS*