ggKbase home page

PLM1_5_b1_sep16_scaffold_1554_4

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(1857..4898)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 1022.0
  • Bit_score: 1211
  • Evalue 0.0
GAF sensor hybrid histidine kinase (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 1018.0
  • Bit_score: 1186
  • Evalue 0.0
Two-component hybrid sensor and regulator Tax=Oscillatoria sp. PCC 6506 RepID=D8FVA6_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 1022.0
  • Bit_score: 1211
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Oscillatoria] sp. PCC 6506 → Kamptonema → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 3042
ACACAGCTGCGTGCGATCTCCGAGGTCTCACAGGCCGTGACGCCGGGCGACCTGACGCGCTCGATCGCGGTCGAGGCCGAAGGGGAGGTCGGGGAGCTGAAGGACACCATCAACCAGATGATCGACAACCTCGCCGAGACGACACGCGTCAACAACGAGCAGGACTGGCTGAACTCGAACATGGCCCGCTTCACCGGCATGCTCCAGGGCGAGCGCGACCTCGAGACCGTGTCGCGACTGATCATGTCCGAGCTGACGCCACTCGTCGGCTCGCAGCACGGCGCGTTCTTCATGATGGAGTCACCTGACGGCGAGGGCGACGACTTCGAGCTCCGGCTCATCGCCACCTACGGCTACAAGCAGCGCAAGAACGTCCCGAACAAGTTCAAGATCGGCGAGGCGCTCGTCGGCCAGGCGGCACTCGAACAGAAGCCGATCCTGATCACGCAGGCGCCCGACGACTACGTCCGCATCAGCTCGGGCCTCGGCGAGGGCGCGCCGGTGAACGTCATCGTCCTCCCCGTCCTGTTCGAGGACCAGGTACGGGCCGTTATCGAACTGGCGTCGTTCCAACGGTTCTCGTCGGTGCAGCAGAGCTTCCTGGAGCAGCTCGCCGAATCGATCGGCGTCGTCCTGAACACGATCCAGGCGAACATGCGGACCGAGGAGCTGCTCGTCCAGTCGCAGGACCTGACCCAGGAGCTGCAGAGCCAGTCCGAAGAGCTCCAGGCCCAGCAGGAAGAGCTGCAGCAGACCAACAAGGAGCTCGAGGAACAGGCCGCCTCGCTCAAGGCCTCGGAGGAGCTGCTGCAGACCCAGCAGGAAGAGCTGCAGCAGACGAACGAGGAGCTCGAGGAGAAAGCGCAACTGCTCGAAGAGCAGAACCGCCGCATCGAGATCAAGAACCGCGAGATCGAGCTGGCCCGGGCCGCACTCGAGGAGAAGGCGGAGCAGCTCTCGGTCTCCTCACGCTACAAGTCCGAGTTCCTCGCGAACATGTCGCACGAGCTGCGCACACCGCTGAACTCGCTGCTGATCCTCGCGAAGCTCCTGTCCGAGAACCCCGAGTCGAACCTGAACGAGAAGCAGATCGAGTTCGCGAACACGATCTACGGTGCCGGGTCGGATCTGCTGAGCCTGATCAACGACATCCTCGACCTTTCGAAGGTCGAGGCAGGCCGGATGGACGTCAACGTCAGCGACGTCAAGCTCTCCGACCTCCGCGACTTCGTCGAGCGCTCGTTCCGGCCGGTCGCGGAGGACGAGGACCTCGGCTTCGAGATCGAGGTGCACGGCGCAAACGTGCCGCCCACGATCGAGACGGACGAGCAACGGCTGCAGCAGGTGATCAAGAACCTGCTCTCGAACGCGTTCAAGTTCACCAGGTCCGGCAAAGTCAAGCTGCGGATCGGCCTGGCCGAGGGCCGCCAGTTCGCGAGCGAAGCATTGTCGCGAGCCGAGGCGGTGCTCGAGTTCTCCGTGGAAGACACGGGGGTGGGCATCCCGCACGACAAGCTGCGCCTGATCTTCGAAGCGTTCCAGCAGGCCGACGGGACCACGAGCCGTCGTTACGGCGGCACGGGCCTCGGTCTCTCGATCAGCCGCGAGATCGCGCGGCTCCTCGGCGGCGAGATCCACGTCGAGAGCGCAGTCGACGAGGGAAGCAAGTTCACGCTGTTCCTGCCGGCGTCGTTCCGCCACGTCGAGCACCCGGCTGTGGACGATGCGGTGGACGACACGGTGATCTTCCCGGTCGAGAGCGACGGCAACGGCACGGCGCCACCCGCGCACGAGCCTCCCGAGCTCGACCCGGCGCTGCTGCTGCCGAGCGACGTGCGCGACGACCGCGACGAGATCCAGGACGACGACCGCGTCGTGCTGATCGTCGAGGACGACCCCGAGGTCGCCCGCACCGAGCTCGAGGTCGCCCGTGAGCGCGGCTTCAAAGGCATCGTTGCGCTCCGCGGCGATTCCGGGCTCGCGCTCGCGCACGAGTACAAGCCCGACGCGATCATCCTCGACATGAAGCTGCCGGTGATGGACGGCTGGACGGTCCTCGATCACCTGAAGCACCATCCGGAAACGCGTCACATCCCCGTGCACATCGTCTCCGCGGGCGACGGGCGCCAGAACGCGCTGAAAGCCGGAGCGGTCGCGTTCGTCGAGAAGCCGATCTCGAAGGAGGTTCTCGAGGAGACCTTCGGCGAGATCCGCAGTTTCATCGACCGCGAGCTGAAGCGCGTGCTCGTGATCGAGGATGACGAGGCACAGCGCAATGCCGTCATCGAGCTGATCGGTGGTGGCGACGACGTCGAGGTGAGTGCGGCCGGGTCCGGCGAGGAGGCGCTCGAGGCGCTCGAGCTCCAGCGTTTCGACTGCATGGTGCTCGACCTCAAGCTTCCGGAGATGGGTGGCTTCGCGCTGCTCGAGAAGCTCAAGGAAGACCCGCGCTACTCCTCGATCCCGGTCATCGTCTACACCGGCAAGGAGCTGACCCGCCGGGAGGAGACGAAGCTCAAGAAGTTCGCCGAGTCGATCGTGGTCAAGGACGCGAGCTCGCCCGAGCGGTTGCTCGACGAGACGTCGCTCTTCCTCCACCGCGTCGAGGGAAAGCTTCCCCAGGAGAAGCGCAAGATGCTGGAGCAGCTTCATTCCGCCGAGGAGGTCTTCAACCACAAGAAGATCCTGATCGTCGACGACGACGTGCGGAATGTCTTCGCGCTCACGAGCGTCCTCGAGTCGCACGGCATGGAAGTGATGTACGCCGAGAACGGCGAGGACGGCATCGACCTCCTACAGCGTCACCCCGAGATCGACCTCGTCCTGATGGACATCATGATGCCGGGGATGGACGGCTACGAGACGATGCGGGCCATCCGCTCGGAGGAGGGCTTCAAACAGCTCCCGATCATCTCCTTGACCGCCAAGGCGATGAAGGGCGACCGCGAGAAGTCGATCGCCTCGGGCGCCTCGGACTACATCACGAAGCCCGTCGATACCGATCAGCTGCTTTCCCTGATGCGAGTCTGGCTGTACAAGTAG
PROTEIN sequence
Length: 1014
TQLRAISEVSQAVTPGDLTRSIAVEAEGEVGELKDTINQMIDNLAETTRVNNEQDWLNSNMARFTGMLQGERDLETVSRLIMSELTPLVGSQHGAFFMMESPDGEGDDFELRLIATYGYKQRKNVPNKFKIGEALVGQAALEQKPILITQAPDDYVRISSGLGEGAPVNVIVLPVLFEDQVRAVIELASFQRFSSVQQSFLEQLAESIGVVLNTIQANMRTEELLVQSQDLTQELQSQSEELQAQQEELQQTNKELEEQAASLKASEELLQTQQEELQQTNEELEEKAQLLEEQNRRIEIKNREIELARAALEEKAEQLSVSSRYKSEFLANMSHELRTPLNSLLILAKLLSENPESNLNEKQIEFANTIYGAGSDLLSLINDILDLSKVEAGRMDVNVSDVKLSDLRDFVERSFRPVAEDEDLGFEIEVHGANVPPTIETDEQRLQQVIKNLLSNAFKFTRSGKVKLRIGLAEGRQFASEALSRAEAVLEFSVEDTGVGIPHDKLRLIFEAFQQADGTTSRRYGGTGLGLSISREIARLLGGEIHVESAVDEGSKFTLFLPASFRHVEHPAVDDAVDDTVIFPVESDGNGTAPPAHEPPELDPALLLPSDVRDDRDEIQDDDRVVLIVEDDPEVARTELEVARERGFKGIVALRGDSGLALAHEYKPDAIILDMKLPVMDGWTVLDHLKHHPETRHIPVHIVSAGDGRQNALKAGAVAFVEKPISKEVLEETFGEIRSFIDRELKRVLVIEDDEAQRNAVIELIGGGDDVEVSAAGSGEEALEALELQRFDCMVLDLKLPEMGGFALLEKLKEDPRYSSIPVIVYTGKELTRREETKLKKFAESIVVKDASSPERLLDETSLFLHRVEGKLPQEKRKMLEQLHSAEEVFNHKKILIVDDDVRNVFALTSVLESHGMEVMYAENGEDGIDLLQRHPEIDLVLMDIMMPGMDGYETMRAIRSEEGFKQLPIISLTAKAMKGDREKSIASGASDYITKPVDTDQLLSLMRVWLYK*