ggKbase home page

PLM1_30_coex_sep16_scaffold_8416_7

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 6586..7074

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel protein MscS; K03442 small conductance mechanosensitive channel bin=bin8_Chloro species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 131.0
  • Bit_score: 171
  • Evalue 6.70e-40
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 139.0
  • Bit_score: 154
  • Evalue 1.80e-35
Tax=RBG_16_RIF_CHLX_70_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 165.0
  • Bit_score: 232
  • Evalue 2.60e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 489
GTGAGTGGCACGGTCGAAGACTTCAGCCTGCGGCGGACGACGCTCCGGGACCTCGACGGCATCGTCCACACTGTCCCGAACGGCGAGATCAAGGTCGCCAGCAACAGGACCCGGACGTGGGCGCGGATCAACCAGAACGTCATGGTCGCATTCGGTACCGACATCGACAAGGCGATCGGCGTCGTCGACGAGGTCGGCCGGGAGATGGCGTCAGATCCAGCCTGGATTGGCATCCTCCTGGAGGTGCCCCGCGTCGAGCGGGTCGAGTCGATCGACGAGATGGGGATCACGCTCAAGATCCTCGGCACGGTCCGGGCGCCCGAACAGTGGGCTGCGTCCGGCGAATTCCGCAAGCGCCTCCTCGCCGCGTTCGCGGAGCACGGCATCGAGATCCCGCGGCCGCACCGGGTGGTCTTCACAGGCGAGGGCGGCACGGCGACCCTGCCCTCGAGCGGCCCGACCGAGGAAGAACTCTCCGAAGAGGAGTAG
PROTEIN sequence
Length: 163
VSGTVEDFSLRRTTLRDLDGIVHTVPNGEIKVASNRTRTWARINQNVMVAFGTDIDKAIGVVDEVGREMASDPAWIGILLEVPRVERVESIDEMGITLKILGTVRAPEQWAASGEFRKRLLAAFAEHGIEIPRPHRVVFTGEGGTATLPSSGPTEEELSEEE*