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PLM1_5_coex_redo_sep16_scaffold_125_34

Organism: PLM1_5_coex_sep16_Aeromicrobium_marinum_64_17

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(29170..29874)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7J1_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 208.0
  • Bit_score: 233
  • Evalue 2.10e-58
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 208.0
  • Bit_score: 233
  • Evalue 5.90e-59
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU72184.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 208.0
  • Bit_score: 233
  • Evalue 2.90e-58

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGTCGAGCGAGGACGGCGATCTTGGCCGGCTTCCGAAACCGGCGTCCAAGACTGCCGGTCCCGCCGATGCTTCGTTGGTCGATCGGCTCCGTGCGGGCGACGCAGAGGCTTTCGCCGAGATCGTACGGGCGTGGTCCCCGATGATGTTGCGCGCGGCGCGCAGCTATGTCTCGACGGACGCGTCAGCGCAGGAAGTGGTCCAGGATGCCTGGATGGCACTGGTCCGTGGCCTGGACCGGTTCGAAGGCCGTTCGTCGCTGCGGACCTGGATGCTGGCCATTCTCGGCAACATCGGCCGGAGCCGCGGCGTACGCGAAGCGCGTACCGTGCCGTGGTCGTCGCTAGGCCCAGTGGACGATGACAGCCCGGCGGTGGATCCTGACCGCTTCCAAGGTCCGGACGATGCTTGGCCGCGACATTGGACTCCGCTCGGCAGCCCACGGCCCTGGCCGCGTTCACCCGAGGAGGAGACCATGGCTGCCGAAAGTCGTAGCCAGATCGAAGACGGCTTGGCCCAGCTGCCCGAGCGGCAGCGGACGGTGGTGACGCTGCGCGACGTCCACGGGTTGTCCTCCGATGAGGTCTGCTCCATTCTCGGCCTCAGCGCCAGTAACCAGCGCGTGCTGCTGCACCGCGGCCGCTCCCGTTTGAGGGCGCACCTTGAGCTCTACTACGCTGCCGGCGCTTCGGCGATGGGCTCATGA
PROTEIN sequence
Length: 235
MSSEDGDLGRLPKPASKTAGPADASLVDRLRAGDAEAFAEIVRAWSPMMLRAARSYVSTDASAQEVVQDAWMALVRGLDRFEGRSSLRTWMLAILGNIGRSRGVREARTVPWSSLGPVDDDSPAVDPDRFQGPDDAWPRHWTPLGSPRPWPRSPEEETMAAESRSQIEDGLAQLPERQRTVVTLRDVHGLSSDEVCSILGLSASNQRVLLHRGRSRLRAHLELYYAAGASAMGS*