ggKbase home page

PLM2_5_b1_sep16_scaffold_23_84

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(92800..93168)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium gracile (strain ATCC 27147 / PCC 6307).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 116.0
  • Bit_score: 121
  • Evalue 4.90e-25
Ribonuclease VapC Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P392_CYAGP similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 116.0
  • Bit_score: 121
  • Evalue 3.50e-25
nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 116.0
  • Bit_score: 121
  • Evalue 1.00e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cyanobium gracile → Cyanobium → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGATCGTCCTCGCCGACACCTCCGTCTGGCTCGACCATTGGCGGCACAGGAACGAGCGCCTGGCGACGCTTCTCACCCAGGCCCGGATTGTCGTCCACCCGTTCGTACTCGGCGAAATCGCGCTGGGGACCGTCACGCCGCGCGCCGAGGTGCTCCAGCACCTCGCGAAGCTCGATGCGGCCCGCGTCGCCCAACAGGGCGAAGTGATGGCGCTGATCGAGCGCACGCCACTCTGGGGCCGGGGAATCGGCTGGGTCGACGCCCACCTACTGGCCTCCGCCCTGCTCGATCGCCTGCACCTCTGGACGCTCGACCGTCGACTGGCGACCGTGGCGCACGACCTGGGTCTCGGGGCTCCGATGACGTGA
PROTEIN sequence
Length: 123
VIVLADTSVWLDHWRHRNERLATLLTQARIVVHPFVLGEIALGTVTPRAEVLQHLAKLDAARVAQQGEVMALIERTPLWGRGIGWVDAHLLASALLDRLHLWTLDRRLATVAHDLGLGAPMT*