ggKbase home page

PLM2_5_b1_sep16_scaffold_5_217

Organism: PLM2_5_b1_sep16_Actinobacteria_Rubrobacteridae_69_19

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(219243..220415)

Top 3 Functional Annotations

Value Algorithm Source
group 1 glycosyl transferase bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 397.0
  • Bit_score: 265
  • Evalue 8.20e-68
glycosyl transferase group 1 protein similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 376.0
  • Bit_score: 260
  • Evalue 5.70e-67
Tax=RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 388.0
  • Bit_score: 271
  • Evalue 9.50e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
GTGAAGCTCGAAGGGCGCGACATCGTCTGCATCGGCACGGCCGACTGGGCCACCGAGCTTCCGATCAACCAGCACCAGCTGATGGGACGCCTGGCGCGGTCCAATCGGGTCCTCTTCGTCGAGTCGCTGGGGCTGCGCCGTCCCCAGCTTGCCTCGCGCGATCTGCGGCGCGTCGGCCGAAGGTTGGTTCGTGGGCTGCGCGGCGTGCGGCCGGCCGACGGGCTCCACGTGCTCTCGCCGCTCGTGCTCCCCCTTCACGGCAGCGCCGCGATCCGCACGCTCAATCGACGCCTGCTGCGAGGTCAGGTAGGCAGGGCGGCAAGGCGCCTCGGCATGCGCAGGCCGATCCTCTGGGCCTACGCTCCGCAGGCGGAGGCACTGCGCGACGTGCTCGACCCCGAGCTCGTCGTCTACCACTGCGTCGACGACGTGGCCGCCCAGAAAGGAGTCGACGCGGAGGGGTTTCGCACGACCGAGGAGCGTTTCGCCCGTGGCGCGGACCTGGTCCTGGCCAGCGCGCCAGCGCTGGCCGAGCGGATGCGCTCGCTCTCTGAAAACGTCCTCTACGCCCCGAACGTCGCCGACACTGCGCTGTTCGCGAGCGCACTGGAGACCGGCCCGGTGGACGCCGCGGTCGAAGACCTGCCGCGGCCGCGCCTGGTCTTCCAGGGCGCGATAGTGGCGACGAAGCTCGACGTCGGCCTGCTGGCCGAGCTCGCCCGCCTGCGGCCTGAGTGGAGCATCGTCCTCGTCGGCCCCAGGGGCGCGGGTGATCCCGGCGGTGACCTCTCGCCCCTCGACCGGGCACCCAACGTCCACATGGTCGGGGCGCGGGACGCGAGCGACCTGCCGGCCGTCCTGCGATCCGCCGACGCCGGGCTGATCCCATATGCGATCAACGACCTGACCCGCAGCGTCTTCCCGATGAAGGTGTACGAGTACCTGGCGGCGGGACTGCAGGTCCTGACGACGCCGCTGCCGGCGCTCGAGGGGACCGGCGCCGTGGACGTCGTCGGGGACGCTCCGCAACTGGTCGAAGCCGTCGAGCGCGAGGGGGGCCTCGACAGCACCGAGCGTCGTCGCGAGCGTTCGCGCGCTGCGGTGGCCCATTCCTGGGAGGCGCGCATCGCCGAGATCGAGCGGGCGCTCTCCCCCGGCGGGAACTTCAGCTAG
PROTEIN sequence
Length: 391
VKLEGRDIVCIGTADWATELPINQHQLMGRLARSNRVLFVESLGLRRPQLASRDLRRVGRRLVRGLRGVRPADGLHVLSPLVLPLHGSAAIRTLNRRLLRGQVGRAARRLGMRRPILWAYAPQAEALRDVLDPELVVYHCVDDVAAQKGVDAEGFRTTEERFARGADLVLASAPALAERMRSLSENVLYAPNVADTALFASALETGPVDAAVEDLPRPRLVFQGAIVATKLDVGLLAELARLRPEWSIVLVGPRGAGDPGGDLSPLDRAPNVHMVGARDASDLPAVLRSADAGLIPYAINDLTRSVFPMKVYEYLAAGLQVLTTPLPALEGTGAVDVVGDAPQLVEAVEREGGLDSTERRRERSRAAVAHSWEARIAEIERALSPGGNFS*