ggKbase home page

PLM2_5_b1_sep16_scaffold_29424_6

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 5236..5760

Top 3 Functional Annotations

Value Algorithm Source
Thermostable 8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:CDM67060.1}; EC=3.2.2.- {ECO:0000313|EMBL:CDM67060.1};; EC=4.2.99.18 {ECO:0000313|EMBL:CDM67060.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 174.0
  • Bit_score: 238
  • Evalue 5.20e-60
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] bin=bin1_lowGC species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 174.0
  • Bit_score: 199
  • Evalue 1.90e-48
N-glycosylase/DNA lyase (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 175.0
  • Bit_score: 137
  • Evalue 2.50e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGGTCTTTTGCTTTTTCACCGGCGGCTGCTCGGCGCGGATGGGACTAAATGCGATCGATGCCGTCAGGCCGCTCCTGTTTACCGGTGACCAGGCAGAACTTGCCGGGGCGCTGACGGGCGTGCATCGATACCCGAATGCCCGTGCACGCTATATCGTTGCCTCGCGTGAATTTCTGAAAGAACATTGCGGACTGCGGCTGCGTAAAAAACTTCGCAGCTTTGAGTGCCGGCTGGAACGCCGCGACTGGCTTGTCCGCGAAAAAGGGATCAAAGGCCTTGGGTACAAAGAGGCGAGCCACTATCTGCGGAACGTCGGCTTTCGCGGATATGCAATTCTGGACAAACATGTTCTGAATTGCCTGGCCGAGCTAAAAATAATCGATGAGCCAAAGCCACCAAACACGAGGGCAAGGTATCTAACGATCGAGGACAAGCTGAAACAATTGACAGATGCCACTGGCATCGATTTCGACGAGTTAGATCTTGTGCTCTGGTCTATGAAAACCGGAGTTATCCTAAAATAG
PROTEIN sequence
Length: 175
MVFCFFTGGCSARMGLNAIDAVRPLLFTGDQAELAGALTGVHRYPNARARYIVASREFLKEHCGLRLRKKLRSFECRLERRDWLVREKGIKGLGYKEASHYLRNVGFRGYAILDKHVLNCLAELKIIDEPKPPNTRARYLTIEDKLKQLTDATGIDFDELDLVLWSMKTGVILK*