ggKbase home page

PLM2_5_b1_sep16_scaffold_38112_2

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 1070..1624

Top 3 Functional Annotations

Value Algorithm Source
Putative lysine decarboxylase {ECO:0000313|EMBL:AIA14846.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 168.0
  • Bit_score: 249
  • Evalue 3.10e-63
Rossmann fold nucleotide-binding protein bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 171.0
  • Bit_score: 124
  • Evalue 1.10e-25
Rossmann fold nucleotide-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 177.0
  • Bit_score: 120
  • Evalue 3.40e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 555
GTGATCGAAAATTCTGACGGCAAAATTGTGACCATTTTTGGCGGCTCTAAATGTTCCGAGACCTCGCAGGAGTACCGTGAAGCGAAAGAACTCGGAGCTCGGCTTGCACGGGCCGGCTTCACCATATGTACCGGGGGATATCTCGGCATTATGGAGGCCGCGTCGCGGGGAGCCCGGGAAATGGGCGGGCGCGTCTTTGGCATCGTAATGAACCAGTTCAAATCGGAACCCAACCGGTATCTTACTGACAAGGTGGCGACCGATCACTTTTACGACAGACTGCAAAATCTGATCACCAGGTCTGTCGGTTTCGTTGCCCTCCGTGGCGGTATGGGCACGGTCACCGAGGTCTCGCTGGTGTGGAACAAACTAATGACCGGTGTGATTGACCGCCGACCTCTCGTTCTTGTGGGCGAATGCTGGAAGCCTGTCGTGGATAGCTGGCAGAAATATCTTGCCGTTAGCGATTCGGATGTGAAATTCCTTGACTTTGCCCCCGATGCTGTCGCGGCTGCCGAGTTGATCATTAAAAAATCCCAGGGAGTCAAAATATGA
PROTEIN sequence
Length: 185
VIENSDGKIVTIFGGSKCSETSQEYREAKELGARLARAGFTICTGGYLGIMEAASRGAREMGGRVFGIVMNQFKSEPNRYLTDKVATDHFYDRLQNLITRSVGFVALRGGMGTVTEVSLVWNKLMTGVIDRRPLVLVGECWKPVVDSWQKYLAVSDSDVKFLDFAPDAVAAAELIIKKSQGVKI*