ggKbase home page

PLM2_5_b1_sep16_scaffold_4255_2

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 1474..2118

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL92_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 213.0
  • Bit_score: 307
  • Evalue 1.00e-80
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 213.0
  • Bit_score: 307
  • Evalue 2.90e-81
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA25021.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 213.0
  • Bit_score: 307
  • Evalue 1.50e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGCGTGTCGTGATCGCCGAGGACTCGGTGCTGCTGCGGGAGGGCCTGGCCCGGCTGCTCGACGAGGCCGGCTTCGAGGTGGTCGGGGCCGTCCCCGACGCCGAGCAGCTGCTGCGCTCGGTCGCCGAGCGGACGCCCGACGTCGTGGTGGCCGACGTCCGGATGCCGCCCACGCACACCGACGAGGGCCTGCGGGCCGCGCTGGTGATCCGGCAGCGCTGGCCCGAGACCGCGGTGCTGGTCCTCTCGCAGTACGTGGAGGAGCGCTACGCGACCGAGCTGCTCGCCGGCAGCACCCGCGGCGTCGGCTACCTGCTCAAGGACCGGGTCGCCGACGTGGACGAGTTCGTGGCCGCGTTGCGCCGGGTCGGCAACGGCGGCGCGGCGCTCGACCCCGAGGTCGTCTCGCAGCTGCTGCTACGCGGCCGCCGCCGCCCGCTGGACGCGCTGACCCCGCGCGAGCAGGAGGTGCTCAAGCTGATGGCCGAGGGCCGGTCCAACGGGGCGATCGCCGCCGCCCTCGTGGTCACCGACGGCGCGGTGGAAAAGCACGTGAGCAGCATCTTCACCAAGCTCGGGCTGACCCCGACCGACACCGACCACCGCCGAGTGCTGGCCGTGCTGTCCTACCTCGACGGCCGGTGA
PROTEIN sequence
Length: 215
VRVVIAEDSVLLREGLARLLDEAGFEVVGAVPDAEQLLRSVAERTPDVVVADVRMPPTHTDEGLRAALVIRQRWPETAVLVLSQYVEERYATELLAGSTRGVGYLLKDRVADVDEFVAALRRVGNGGAALDPEVVSQLLLRGRRRPLDALTPREQEVLKLMAEGRSNGAIAAALVVTDGAVEKHVSSIFTKLGLTPTDTDHRRVLAVLSYLDGR*